Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Homoserine/homoserine lactone efflux protein from Sphingobium sp. HT1-2

 Score =  118 bits (295), Expect = 9e-32
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 5/208 (2%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +H+W  Y+    + S  PG   ++ ++  +++G R +L  + GL   +   ++   +G
Sbjct: 1   MSLHLWWLYVTAVFLISATPGPNMLHVMTQSIAHGPRKALVTMAGLMSAVLLCLIASALG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTAT---TTSHELSQAALLRKAVL 117
           +GAL+  S   F ++++ G AYL+WLGI+ W  RAP+            S  AL    +L
Sbjct: 61  LGALLKASPRLFDILRYAGVAYLIWLGIKAW--RAPVGTADGGDAGPVRSARALYATGLL 118

Query: 118 INLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIR 177
             L+NPK I+F  ALFPQFID  R  W Q  +L ++ V I++     Y     +L R++ 
Sbjct: 119 TGLSNPKLIIFAAALFPQFIDLGRPFWLQLAILIVSFVVIESFWYSVYALGGLRLARWLA 178

Query: 178 SPNIMTRMNKLFGSMFMGCGMLLATAKA 205
             N     N+  G MF+G G  L  A+A
Sbjct: 179 PANRQKLFNRGTGLMFIGFGGALLGARA 206