Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., putative transporter from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 7e-45
 Identities = 79/207 (38%), Positives = 127/207 (61%), Gaps = 4/207 (1%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M + VWL +     V SL+PG+G + S+S+GL YG        +GLQ+GL   I ++  G
Sbjct: 1   MSMEVWLGFFAACWVISLSPGAGAIASMSSGLQYGFWRGYWNALGLQLGLIMQIAIIAAG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHEL---SQAALLRKAVL 117
           +GA++A SA AF +IKW G  YLV+L  ++WR   P+  +  S         +L+ +  L
Sbjct: 61  VGAVLAASATAFQVIKWFGVGYLVYLAYKQWR-ALPMDMSDESGVRPIGKPLSLVFRGFL 119

Query: 118 INLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIR 177
           +N++NPK++VF++A+ PQF++P     PQ++ + +T VT+D +VM GYT LA+ + R +R
Sbjct: 120 VNISNPKALVFMLAVLPQFLNPHAPLLPQYVAITVTMVTVDLLVMAGYTGLASHVLRMLR 179

Query: 178 SPNIMTRMNKLFGSMFMGCGMLLATAK 204
           +P    R+N+ F  +F+G    LAT +
Sbjct: 180 TPKQQKRLNRTFAGLFIGAATFLATLR 206