Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., Leucine efflux protein from Azospirillum sp. SherDot2

 Score =  105 bits (261), Expect = 8e-28
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           +D+H+   Y++   V  LAPG  ++  ++  ++ G +  + A IG+ +G   H +L   G
Sbjct: 5   LDLHLLQLYMVAVCVLVLAPGPDSLLVLTRSIADGRQAGVVATIGICVGNTVHSLLAAAG 64

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQK----WRDRA--PLTATTTSHELSQAALLRK 114
           I AL+A SA  F L+++ G AYL W+G++     W  R   P  +           +  +
Sbjct: 65  ISALIAASASLFDLLRYAGGAYLAWIGLRSLWSVWTSRGAEPAPSIEAPAPAGTGRVFVQ 124

Query: 115 AVLINLTNPKSIVFLVALFPQFIDPTRDHWP-QFLVLGITTVTIDAIVMFGYTALAAQLG 173
           A+L NL NPK I+F +A  PQFI P   H   Q  +LG     +  + + G  AL+A   
Sbjct: 125 ALLTNLLNPKIILFQLAFVPQFIAPDLGHVALQTFILGNIISVLGGVYLVGIAALSAGAA 184

Query: 174 -RYIRSPNIMTRMNKLFGSMFMGCGMLL 200
            R + SP + T ++ + G +F+G  + L
Sbjct: 185 RRVLSSPRVRTVLDGIAGVLFLGFAVRL 212