Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., putative homoserine/homoserine lactone efflux protein from Agrobacterium fabrum C58

 Score =  118 bits (295), Expect = 9e-32
 Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 9/205 (4%)

Query: 1   MDIHVWLAYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIG 60
           M +  WLA++  + +    PG   +  IS  L +G + S   + G+ +G    +    +G
Sbjct: 1   MPLENWLAFVAASAIMLAIPGPTILLVISYALGHGRKASTATVTGVALGDFTAMTASMLG 60

Query: 61  IGALVAQSALAFTLIKWIGAAYLVWLGIQKWRDRAPLTAT------TTSHELSQAALLRK 114
           +GAL+A SA  FT +KWIGAAYL++LGI+ W  R+P+          T  E      L  
Sbjct: 61  LGALLATSAALFTGLKWIGAAYLIYLGIKLW--RSPVGGEGADGQGVTGRERPLKIFLH- 117

Query: 115 AVLINLTNPKSIVFLVALFPQFIDPTRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGR 174
           A ++   NPKSIVF VA  PQF+ PT   WPQ L+   T + +  +    Y  LA+    
Sbjct: 118 AYIVTALNPKSIVFFVAFLPQFLVPTLPFWPQVLIFEATFLVLATVNAALYGLLASAARN 177

Query: 175 YIRSPNIMTRMNKLFGSMFMGCGML 199
            IR P +   +N+  G + +G G++
Sbjct: 178 TIRKPKVQRIVNRTGGGLLIGAGLI 202