Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., RhtB family transporter from Agrobacterium fabrum C58

 Score = 92.4 bits (228), Expect = 5e-24
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 4/202 (1%)

Query: 8   AYLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVAQ 67
           A+ +T  +F+  PG   + + +  ++ G    L A++G+ +G   HI     G+  L   
Sbjct: 9   AFFITTALFAYIPGPAMLYAAAQTMARGRFAGLMAVLGIHVGCYFHIFAAAAGLSVLFQA 68

Query: 68  SALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQA-ALLRKAVLINLTNPKSI 126
               +  +K  GA YL+WLG    R +    A   + E   A      ++++++ NPK+ 
Sbjct: 69  VPWLYLAVKLCGALYLIWLGFSMLRSKLEGEAVNLTIEPKSARRAFIDSIIVDVLNPKTA 128

Query: 127 VFLVALFPQFIDPTRDH--WPQFLVLGITTVTI-DAIVMFGYTALAAQLGRYIRSPNIMT 183
           +F +A  PQF+DP      W QFL+LGI    I  +  + G     A + R  RS  +  
Sbjct: 129 LFFLAFLPQFVDPAAAFPVWLQFLILGIAVNFIFSSADLVGVLLAGAMVRRLKRSSAVQA 188

Query: 184 RMNKLFGSMFMGCGMLLATAKA 205
              ++ G++ MG G+ LA  K+
Sbjct: 189 LARRVAGTVLMGLGVHLAFQKS 210