Pairwise Alignments

Query, 205 a.a., homoserine/homoserine lactone efflux protein from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., RhtB family transporter from Agrobacterium fabrum C58

 Score =  106 bits (265), Expect = 3e-28
 Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 4/196 (2%)

Query: 9   YLLTAVVFSLAPGSGTVNSISNGLSYGTRHSLGAIIGLQIGLACHIVLVGIGIGALVAQS 68
           +L+T+ + + +PG+G V +++ GLS G + S+ A  G  +G+  H++    G+ A++  S
Sbjct: 5   FLITSFIVAASPGTGVVYTLAAGLSQGAKASIIAAFGCTLGIVPHLLAAITGLAAILHTS 64

Query: 69  ALAFTLIKWIGAAYLVWLGIQKWRDRAPLTATTTSHELSQAALLRKAVLINLTNPKSIVF 128
           ALAF ++K++G AYL+++     R+   L    T      A ++ +A+LINL NPK  +F
Sbjct: 65  ALAFGIVKYLGVAYLLYMAWNTLRENGALKIDETRQPQKPARVIGEAILINLLNPKLSIF 124

Query: 129 LVALFPQFIDP--TRDHWPQFLVLGITTVTIDAIVMFGYTALAAQLGRYIRS-PNIMTRM 185
             A  PQFI P      W + + LG+  + +  +V   Y   AA + R + S P ++  +
Sbjct: 125 FFAFLPQFIAPGELSPTW-RMIDLGLIFMALTFLVFALYGCFAASVRRQVVSRPAVLAWL 183

Query: 186 NKLFGSMFMGCGMLLA 201
            + F + F+  G  LA
Sbjct: 184 RRSFAAAFVALGAKLA 199