Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Kangiella aquimarina DSM 16071

 Score =  118 bits (296), Expect = 1e-30
 Identities = 117/467 (25%), Positives = 204/467 (43%), Gaps = 42/467 (8%)

Query: 388 IRHAFHDLDAMTDNLAQQIR--AQTSLLTASYRRDRR----------TGLPNRVVLRERL 435
           +R    +L    DN   Q+      S LT  Y ++ R          T LPNR  L ER+
Sbjct: 389 VRFIRDELQLFADNHNGQVEIVGSWSDLTEIYEKEDRLIFLSQYDPFTHLPNRQKLHERV 448

Query: 436 AN-------FAANEHLIALKVTHFNQINEKYGYPVGDKLLRDLSEQFQVFLDQKLAGQSG 488
                    F  N  ++++ + +F +INE   Y VGD ++  + E+ +  L      +  
Sbjct: 449 EEAIERGQQFNENFAILSIDIDNFKKINETLSYQVGDAVILRMVERLKHILQV----EDS 504

Query: 489 LYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLP-NVDYLSISLCAGL-V 546
           L  IG  E+  V   K D ++        V ++     + +  P  VD   + + A + V
Sbjct: 505 LARIGGDEFVFVINQKTDVEN--------VSKIARKVLKRFAAPLRVDEHELMITASIGV 556

Query: 547 SQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRVSRAVVR 606
           +        PD LL  A  AR  A  +  +       ++ E +  E L   S +  AV R
Sbjct: 557 AIYPEDGRDPDTLLKNAEIARYSAKKSGRNRFEFFNDRLAEGMH-ENLMLESALRVAVER 615

Query: 607 DDVVVYAQPICQARSHIVASYECLVRIEDEG-EIILPGNFLPIITDTHLYTRLSRQMITH 665
           +++V++ QP+       +   E LVR +     +I P  F+P+  +T L   +   ++  
Sbjct: 616 NELVLHYQPLVSFTDITMVGVEALVRWQHPTLGLIPPYKFIPLAEETGLIGEIGLWVLRE 675

Query: 666 TFNMMRHRPEA------FSINLSPQDLMSERTLQHLEAAIKSVADPA-RVGLEVLESEQI 718
               M    EA       S+N+S Q + +    + ++  ++     A R+ LE+ ES  +
Sbjct: 676 ACQQMVQWDEAGNAVGCVSVNISVQQIETGLLPKQVKEVLQDTGLAAERLFLELTESTIM 735

Query: 719 KDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQR 778
           +D  +       F+ +G  + VDDFG+GYS++  + +L    +K+D S I++I QD    
Sbjct: 736 QDPEKAATAMTEFKQMGVKLAVDDFGTGYSSMAYLKRLPLDRLKIDRSFIKDIGQDANDE 795

Query: 779 RIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRP 825
            I + +++L + L  +TVAE V  +      + +G D  QGY   +P
Sbjct: 796 VICKAIIQLAKSLGLETVAEGVEEEAHAEFLKALGCDVAQGYLYSKP 842