Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  115 bits (289), Expect = 7e-30
 Identities = 114/459 (24%), Positives = 201/459 (43%), Gaps = 53/459 (11%)

Query: 395 LDAMTDNLAQQIRAQTSLLTASYRRDRRTGLPNRVVLRERLANFAANEH-------LIAL 447
           L A T  LA  +      L      D  T LPNR++L +RL    +          L+ +
Sbjct: 239 LQARTALLASSLAEANRELAQLALHDTLTRLPNRILLEDRLDQAISKAEREGNHFALMFM 298

Query: 448 KVTHFNQINEKYGYPVGDKLLRDLSEQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKL-- 505
            +  F  IN+ YG+ VGD+LL  ++++  + L     GQ  L  IG  E+  +   +   
Sbjct: 299 DLDGFKAINDAYGHDVGDRLLVAVTQRLLLLLK----GQFTLARIGGDEFVLLAEGEGPD 354

Query: 506 DGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHSPDELLLRAIE 565
           D  S+ +   + ++     N  PY L     +++S+   L       E    EL+  A  
Sbjct: 355 DAASLANSLVRAIDS--PFNLSPYEL----VVTLSIGIALYPHDGKTER---ELMFNADA 405

Query: 566 AR---RYAFNNNHHFCNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSH 622
           A    ++   N +HF   +      ++ Q  L  ++ +  AV R+++ +  QP   A + 
Sbjct: 406 AMYHTKHMGRNGYHFFQPS----MNTLAQTHLQLMNDLWMAVDRNELRLLYQPKFHAPAG 461

Query: 623 IVASYECLVRIEDEGE-IILPGNFLPIITDTHLYTRLSRQMITHTFNMMR------HRPE 675
            V  +E L+R +   + ++ P  FLP+   T L   +   +I      +R      H+  
Sbjct: 462 PVLGFEALLRWQHPKQGLLTPDLFLPLAEKTGLIVPIGNWVINEACRQLREWHLQGHQSW 521

Query: 676 AFSINLSPQDLMSERTLQHLEAA-IKSVAD--------PARVGLEVLESEQIKDYGRMIE 726
           + ++NLS        TLQ  + + +K+V D        P  + LEV E+  + +    + 
Sbjct: 522 SMAVNLS--------TLQFEQPSLVKTVLDCLALHQVPPEMLILEVTETTAMSNPDESVR 573

Query: 727 VCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVK 786
           V       G    +DDFG+GYS++  + +L    +K+D + ++ +  + +   I   +V 
Sbjct: 574 VLTELTDAGVKASIDDFGTGYSSLLYLKRLPACELKIDRAFVKELSGESEDATIVSAIVA 633

Query: 787 LCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRP 825
           L + LN K VAE V  +       ++G + LQGY LG+P
Sbjct: 634 LAKTLNLKVVAEGVETEAQQAFLTELGCNTLQGYLLGKP 672