Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 946 a.a., Cyclic di-GMP phosphodiesterase Gmr from Alteromonas macleodii MIT1002

 Score =  113 bits (283), Expect = 4e-29
 Identities = 103/426 (24%), Positives = 194/426 (45%), Gaps = 29/426 (6%)

Query: 420 DRRTGLPNR----VVLRERLANFAANEHLIA-LKVTHFNQINEKYGYPVGDKLLRDLSEQ 474
           D  TG+ NR     V +E++ N +A    I  L +  F  +N+  G+  GD L++D++  
Sbjct: 527 DSLTGVYNRRQFESVFKEKVHNHSALPVCILFLDLDRFKVVNDTCGHKAGDVLIKDVAR- 585

Query: 475 FQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNV 534
               ++  L   + L  +G  E+  ++ + LD  +++ +  + +  ++   F    + + 
Sbjct: 586 ---LIENTLLPNAQLARLGGDEFGVIY-SDLDADAVYLNAVKILNAVQAYRF----MWDN 637

Query: 535 DYLSISLCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQER- 593
              ++ +  G+V   D +  S  + L  A  A  +A     +  +      +   R +R 
Sbjct: 638 RIFNLGVSIGMVVCDD-SNVSSGQYLSMADAACYFAKEQGRNQVHKYNKDDENMQRYQRE 696

Query: 594 LNWLSRVSRAVVRDDVVVYAQ---PICQARSHIVASYECLVRI-EDEGEIILPGNFLPII 649
           L+W+S ++ A+      +Y Q   P+ +A       YE L+R+ E +G+I+ P NFLP  
Sbjct: 697 LDWVSSINNALEEGRFELYYQSLRPLSKASDGHY--YEVLLRLREKDGKIVEPANFLPTA 754

Query: 650 TDTHLYTRLSRQMITHTFNMMRHRPEAF------SINLSPQDLMSERTLQHLEAAIKSVA 703
               +   + + ++T+TF  +   PE        SINL+   L        +  A ++  
Sbjct: 755 ERFEMNVNVDKWVVTNTFKWLSENPEHLAELRRCSINLNCHSLADRDFTLFILNAFETFN 814

Query: 704 DPA-RVGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIK 762
            P  ++  EV+ES  I      +     F  LG +  +DDFGSG+S+   +  L    +K
Sbjct: 815 IPYNKICFEVIESVAIIKMEDTLAFMRTFNRLGCSFALDDFGSGFSSYSYLKSLPVNQVK 874

Query: 763 LDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFL 822
           +DG  I+++  D     +   +  + + +  +TV EFV N+        MGVD+ QGY +
Sbjct: 875 IDGMFIKDMLNDSVDTAMVASINDVAKAMGMQTVGEFVENEGTMAQLGKMGVDFAQGYSV 934

Query: 823 GRPSRL 828
            +P+ L
Sbjct: 935 AKPAPL 940