Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 814 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  114 bits (284), Expect = 3e-29
 Identities = 120/479 (25%), Positives = 215/479 (44%), Gaps = 60/479 (12%)

Query: 382 SPLFNLIRHAFHDLDAMTD---NLAQQIRA---QTSLLTASYRR----DRRTGLPNRVVL 431
           SP+F        +LD + D   NLA+Q+ +   Q ++ TA   +    D  TGLPNR +L
Sbjct: 338 SPIFKFT----DELDVVEDAANNLARQLESFDGQMAINTAKLEKMAMFDVLTGLPNRNML 393

Query: 432 ----RERLANFAANEHLIALK---VTHFNQINEKYGYPVGDKLLRDLSEQFQVFLDQKLA 484
                ++LA    ++ L+AL    +  F ++N+ +G+ VGDKLL+  + +       K  
Sbjct: 394 TFQIEKQLAGSIRDDRLVALMFMDLDDFKKVNDSHGHDVGDKLLKAAAMRIS-----KPI 448

Query: 485 GQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVD-YLSISLCA 543
            +S + +   G+   +  + ++ K    H     ++L     EP  +  V  Y+SIS+  
Sbjct: 449 RESDIASRFGGDEFVILLSNIESKK---HVDTVAKKLIEEFKEPIIVDGVTFYVSISIGI 505

Query: 544 GLVSQGDFAEHSPDELLLRA----IEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSR 599
            + +    +  +P ELL  A     EA+         +     LKV + V       L  
Sbjct: 506 AITNH---SRATPVELLRHADIAMYEAKAKKGAEYRVYDATMNLKVMQKVE------LES 556

Query: 600 VSRAVVRDDVVVYA-QPICQARSHIVASYECLVRIEDEGE-IILPGNFLPIITDTHLYTR 657
            +R  +RD+    A QP  +  +  +  +E L+R +   +  I P +F+P++ +T     
Sbjct: 557 EAREALRDNQFSLALQPQLEMHTGRLVGFEALLRWQHPKKGNISPADFIPLLENTSFMLE 616

Query: 658 LSRQMITHTFNMMRHRPEA------FSINLSPQDLMSERTLQHLEAAI-KSVADPARVGL 710
           L   +IT +  ++R    +       +INLS    +     + L+  I K+   P +V L
Sbjct: 617 LDYWVITRSTYLIRELKNSGYSDVKMAINLSAGQFLDPSLPEFLQQQIIKNDIAPDQVCL 676

Query: 711 EVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRN 770
           E+ E+  + D  R   +  + R +G  + +DDFG+GYS++  +  L    IK+D S + N
Sbjct: 677 ELTETVLVSDIKRATTIMQNIRDMGCMLAIDDFGTGYSSLSYLKSLPADYIKIDRSFVAN 736

Query: 771 IDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHN----QTVCRISEDMGVDYLQGYFLGRP 825
           I      R I    + + + +  + VAE +      + +C    ++G    QGY + RP
Sbjct: 737 IASSADDRNIVHSTISMVRNMGMQVVAEGIETSEQYELLCHFDCNLG----QGYLISRP 791