Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., recombinase XerC from Pseudomonas simiae WCS417

 Score =  236 bits (602), Expect = 5e-67
 Identities = 125/295 (42%), Positives = 194/295 (65%), Gaps = 3/295 (1%)

Query: 13  LAQPLERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQG 72
           + + L+ + A+L  E+ +S +T   Y++ L  +  Y  +  ++ W  LD   +R L+ + 
Sbjct: 1   MERQLDAYCAHLRNERQVSPHTLEAYRRDLNKVLAYCEKQQISSWKALDIQSLRSLIARL 60

Query: 73  KRQGMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLL 132
            + G  + S++  LS++R    +L   G    +PA G+S P+ +R LPK LD D   QLL
Sbjct: 61  HQAGQSSRSLSRLLSAVRGLYHYLNREGLCDHDPANGLSPPKGERRLPKTLDTDRALQLL 120

Query: 133 E-VTDDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFA 191
           +   +DD L+ RD+AI+EL Y +GLRL+EL  +++  ++L++G ++V+GKG+K R +   
Sbjct: 121 DGAVEDDFLAHRDQAILELFYSSGLRLSELTGLNLDQLDLADGLVQVLGKGSKTRVLPVG 180

Query: 192 GQAQEWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHK 251
            +A+E +  WL LR  L + A+ A+FVS+ G R+  R++Q R+   G+++ +  ++ PH 
Sbjct: 181 RKAREALQLWLPLRL-LTNPADDAVFVSQQGRRLGPRAIQVRVKAAGERE-LGQNLHPHM 238

Query: 252 LRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARK 306
           LRHSFA+HMLESS +LRAVQELLGH +I TTQIYTHLDFQHLA VYD AHPRA++
Sbjct: 239 LRHSFASHMLESSQDLRAVQELLGHSDIKTTQIYTHLDFQHLATVYDSAHPRAKR 293