Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., site-specific tyrosine recombinase XerC (NCBI) from Escherichia coli BW25113

 Score =  338 bits (867), Expect = 9e-98
 Identities = 167/290 (57%), Positives = 220/290 (75%), Gaps = 1/290 (0%)

Query: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQGKRQG 76
           +ER+  YL  E+ LS  T  NY++QLE +  +  + GL  W Q D   VR   ++ +R+G
Sbjct: 8   VERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFAVRSRRKG 67

Query: 77  MKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEVTD 136
           + A+S+A RLS+LRSF D+L+ + EL+ANPAKGVSAP+  R LPKN+DVD+M +LL++  
Sbjct: 68  LGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDIDI 127

Query: 137 DDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQE 196
           +DPL++RDRA++E+MYGAGLRL+ELV +DIK ++L  GE+ V+GKG+KER++     A  
Sbjct: 128 NDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVA 187

Query: 197 WVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHKLRHSF 256
           W+  WL LR  L  S + ALF+SKLG RIS R+VQKR AEWG KQ + +H+ PHKLRHSF
Sbjct: 188 WIEHWLDLR-DLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSF 246

Query: 257 ATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARK 306
           ATHMLESS +LR VQELLGH N++TTQIYTHLDFQHLA VYD AHPRA++
Sbjct: 247 ATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKR 296