Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., diaminopimelate epimerase from Rhodanobacter sp000427505 FW510-R12

 Score =  257 bits (656), Expect = 2e-73
 Identities = 133/274 (48%), Positives = 170/274 (62%), Gaps = 1/274 (0%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF 60
           M   F KMHG+GNDF+V+DC           IR LADRHTGVGFDQLL +E   +P   F
Sbjct: 1   MQLRFWKMHGIGNDFVVLDCRHGGFSLDAAQIRALADRHTGVGFDQLLSIEPARNPACAF 60

Query: 61  HYRIFNADGSEVEQCGNGARCFARFVRMKG-LTNKYTIHVSTKKGKMVLNVEEEDLITVN 119
           +Y I+NADGS   QCGNG RC A ++   G L     + + +  G + +     + +TV+
Sbjct: 61  YYGIWNADGSPSGQCGNGVRCVAAWLHRAGALAIGQDVMIESPSGPVTVRPLGANQVTVD 120

Query: 120 MGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGP 179
           MG P FEP +IPF A      Y + +   TL  GAVSMGNPH V  VDD+   A++ LGP
Sbjct: 121 MGEPVFEPARIPFAADAVADRYAIDLAGETLDIGAVSMGNPHAVVAVDDLADPALQRLGP 180

Query: 180 LLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQ 239
           LL  H RF +  NAGF+Q + R  + LRV+ERGAG T ACG+GACAA+AV   +G +D+ 
Sbjct: 181 LLTKHPRFTQGANAGFVQRLDRSHLRLRVHERGAGWTLACGTGACAAMAVLRRRGEVDDA 240

Query: 240 VRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQ 273
           V V LPGG L I W GPG  L+MTGPA   ++G+
Sbjct: 241 VAVELPGGTLRIDWAGPGHTLWMTGPAAFAFEGE 274