Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Diaminopimelate epimerase from Xanthobacter sp. DMC5

 Score =  159 bits (401), Expect = 8e-44
 Identities = 101/275 (36%), Positives = 132/275 (48%), Gaps = 4/275 (1%)

Query: 2   HFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFH 61
           H  F KM+GLGN+ +V+D     V   P   R LA R + + FDQ +V+  P   ++   
Sbjct: 6   HRPFVKMNGLGNEILVLDLRADPVEVPPAAARALA-RPSVLPFDQAMVLYPPRRADTAAF 64

Query: 62  YRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMG 121
            RI N DGS    CGNG RC A     +  T    I   ++ G +   V  +  + V+MG
Sbjct: 65  VRILNNDGSISAACGNGTRCIAALEAER--TGTPHILFESEAGLLDCTVRPDGQVKVDMG 122

Query: 122 VPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGA-VSMGNPHVVTVVDDIRTAAVETLGPL 180
            P      IP      +   +L      L     VSMGNPH +  V D     VE LG  
Sbjct: 123 APRLGWRDIPLAHDVGDTASVLVPSFENLGPAVTVSMGNPHAIFFVSDADAMDVEGLGAA 182

Query: 181 LESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQV 240
           LE H  FPER N  F  + + D I L V+ERGAG T+ACG+ ACA     +  G     V
Sbjct: 183 LEHHPLFPERANISFASLTAPDRILLHVWERGAGRTRACGTAACATGVAAVRTGRTGRAV 242

Query: 241 RVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQIS 275
            V LPGG LEI W+     + MTGP  H + G ++
Sbjct: 243 TVTLPGGPLEIEWRESDGHVLMTGPVEHEFAGTLT 277