Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

 Score =  149 bits (377), Expect = 5e-41
 Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 10/272 (3%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF 60
           M   F KMH  G+DF+++D    +   + ++ R+L +RHTG+GF+QL V+    D  +  
Sbjct: 1   MPLPFVKMHAHGDDFIIIDRRGLHDPITAKVARQLGNRHTGIGFNQLAVLLDCDDAAA-- 58

Query: 61  HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM 120
             + +N +G+ +  CG+  R  A  +  +  T+   +   T +G +         I+VNM
Sbjct: 59  RIKFWNPNGTLLATCGSATRGVADRLMHEAGTDSVVLR--TDRGLLTCARAAGRQISVNM 116

Query: 121 GVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPL 180
           G P  + + +P    ++  T  L +  +   C   SMGNPH    V+D+    V T+GP 
Sbjct: 117 GEPSLDWSAVPLA--EAMDTLTLPIDGNPAAC---SMGNPHCTFFVEDLTAVDVATVGPA 171

Query: 181 LESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQV 240
           LE H  FP + N  F+QV+ R  I LR++ERG G     GS  C AV  GI +GLLD  V
Sbjct: 172 LEIHPLFPAKTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGLLDATV 231

Query: 241 RVHLPGGELEIHWQGPGKPLYMTGPATHIYDG 272
           +VH  GG + +HW G G  + +TG    +  G
Sbjct: 232 QVHCDGGTVTVHWAGEG-AVVLTGSVEPVMQG 262