Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 61/234 (26%), Positives = 90/234 (38%), Gaps = 33/234 (14%)

Query: 45  DQLLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFVRMKG-LTNKYTIHVSTKK 103
           D LLV   P+  E  F   I N DGS  E+ GNG   FA+ +  +G L+    + V   K
Sbjct: 67  DGLLV--GPFQAEPPFDLMIVNTDGSLAERSGNGLTIFAQALTDQGLLSGACELRVHHDK 124

Query: 104 GKMVLNV---------EEEDLITVNMGVPEFEPNKIPFRAKQSEK-----TYILRVGEHT 149
              V  V         E+     + +GVP F P  +  + +  E      + +  +    
Sbjct: 125 SDAVSPVSTWVEPAIREQVAGFWLELGVPGFGPEVVGAQMEVDETELSHVSELAAINPQW 184

Query: 150 LFCGAVSMGNPHVVTVVDDIRTAAVET---------------LGPLLESHERFPERVNAG 194
                V +GNPH VT+V+ +      T                 P        P  VN  
Sbjct: 185 AASQFVRVGNPHCVTLVEQVSALPDNTQMQQPALYEPLKTIAFAPPAGGGRPCPAGVNLQ 244

Query: 195 FMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDE-QVRVHLPGG 247
           +      + I  RV+ERG G T + G+ A A        G ++  +V V +PGG
Sbjct: 245 WAARQPGNRIIARVFERGEGPTASSGTSASAVACAAWRAGWVESGEVAVVMPGG 298