Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Sphingobium sp. HT1-2

 Score =  203 bits (517), Expect = 3e-57
 Identities = 120/275 (43%), Positives = 158/275 (57%), Gaps = 13/275 (4%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVV-EAPYDPESD 59
           M   FSKMHGLGNDF+V+D     V  +    R +ADRH G+G DQL+V+ +A    ++D
Sbjct: 1   MMSRFSKMHGLGNDFVVIDARQAPVAMTEARARAIADRHAGIGCDQLIVIGDAEAGDQAD 60

Query: 60  FHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDL-ITV 118
               IFN+DGSEVE CGN  RC   FV    L       + T+ G  +L+ +  D   +V
Sbjct: 61  VSMLIFNSDGSEVEACGNATRCVPLFVGKDVL-------IRTRAG--LLDAKGVDGGASV 111

Query: 119 NMGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLG 178
           +MG P F+ + IP        T +    E      AV++GNPHV+  V+D+     E LG
Sbjct: 112 DMGAPRFDWDAIPLAYPMDTLT-MSASWEDLPAPAAVNVGNPHVIFFVEDLDAVDFERLG 170

Query: 179 PLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDE 238
           PL+E    FP RVN  F QVV    + L V+ERGAG T+ACG+GACA     I + L+  
Sbjct: 171 PLIEHDPLFPARVNVNFAQVVGPQHLRLIVWERGAGLTRACGTGACATAVAAIRRKLMAG 230

Query: 239 QVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQ 273
            V V LPGG+LEI W  PG  + MTGPATH++DG+
Sbjct: 231 PVTVSLPGGDLEIDW-APGSTIRMTGPATHVFDGE 264