Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 1e-35
 Identities = 89/268 (33%), Positives = 132/268 (49%), Gaps = 19/268 (7%)

Query: 5   FSKMHGLGNDFMVV-DCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESD-FHY 62
           F K H  GND++V  DC+  +   S  +I R+ DRH G+G D +LV   P   E +    
Sbjct: 3   FYKYHAAGNDYLVYRDCVPFDC--SKPMISRICDRHRGLGSDGILV---PVIKEGERLSV 57

Query: 63  RIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNV-EEEDLITVNMG 121
           RI+N DGS+ E+ GNG R   R++  + +       +STK G +   V +    I++ MG
Sbjct: 58  RIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAMG 117

Query: 122 VPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLL 181
              F           +   + + V    L    VSMGNPH V  VD         LGPL+
Sbjct: 118 QAAFA----------NTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPLI 167

Query: 182 ESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVR 241
           E    FP+R N  F++V+ R  + ++++ERG G T + G+ +CAA AV    GL+  +V 
Sbjct: 168 ERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRVA 227

Query: 242 VHLPGGELEIHWQGPGKPLYMTGPATHI 269
           V++ GG + I        L M GP   +
Sbjct: 228 VNMAGGVIMIELDDDYHVL-MQGPVCRV 254