Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., DeoR family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 37/238 (15%)

Query: 45  DQLLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFVRMKGL-TNKYTIHVSTKK 103
           D LLV   P+  E  F   I N DGS  E+ GNG   FA+ +  + L T+   + V   K
Sbjct: 67  DGLLV--GPFQAEPPFDLLIVNTDGSLAERSGNGLTIFAQALTEQALMTDACELRVHHDK 124

Query: 104 GKMVLNVE-------EEDL--ITVNMGVPEFEPNKIPFR---------AKQSEKTYILRV 145
              V  V         ED+    + +G+P F P+ +  +         A+ S  + +  +
Sbjct: 125 TDAVSPVATRVEPSVREDVAGFWLELGLPTFGPSAVGAQGVDQAFLEGAELSHISELTAI 184

Query: 146 GEHTLFCGAVSMGNPHVVTVVDDI----------RTAAVETL-----GPLLESHERFPER 190
                    V +GNPH VT+V+ +          + A  E L      P     +     
Sbjct: 185 NPQWATSQFVRVGNPHCVTLVERVSALPDNAQMQQPALFEALKAIAFAPPAGGGQPCAAG 244

Query: 191 VNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDE-QVRVHLPGG 247
           VN  +    SR+ +  RV+ERG G T + G+ A A        G ++   + V +PGG
Sbjct: 245 VNLQWAARESRNRLIARVFERGEGPTASSGTSASAVACAAWRAGWVESGDIAVVMPGG 302