Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  265 bits (676), Expect = 1e-75
 Identities = 141/285 (49%), Positives = 180/285 (63%), Gaps = 11/285 (3%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF 60
           MH  F+KM G GNDF+V+D     +  S    R LADRH GVG DQ+L V A      DF
Sbjct: 1   MHIRFTKMQGAGNDFVVLDETRGRLGLSAAQYRFLADRHFGVGADQILSVRASPGRGLDF 60

Query: 61  HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM 120
            Y I NADG +VEQCGNGARCF R+V  KGL+    + V     ++ L +  +  +TV+M
Sbjct: 61  EYVIHNADGGQVEQCGNGARCFVRYVHDKGLSTNNPLRVKVMNAELELKMHADGRVTVDM 120

Query: 121 GVPEFEPNKIPFRAKQS--------EKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTA 172
           G P F  +++PF A+          E+  +       +    +SMGNPH V +VDD++ A
Sbjct: 121 GPPVFALDRVPFSAEGLTAEPMGGFERWPLALPYAGDVPVAVLSMGNPHAVLLVDDVQAA 180

Query: 173 AVETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGIL 232
            V + GP +ESHERFP RVNAGF+QVVSR E+ LRVYERGAGET ACG+GACAAV  GI 
Sbjct: 181 PVPSWGPWIESHERFPRRVNAGFLQVVSRGEVRLRVYERGAGETLACGTGACAAVVAGIR 240

Query: 233 QGLLDEQVRVHLPGGELEIHWQ---GPGKPLYMTGPATHIYDGQI 274
            GLLDE+V VH  GG L I W+      +P++MTGPAT ++DG+I
Sbjct: 241 LGLLDERVDVHTRGGVLTIEWKDTPAHDQPVFMTGPATTVFDGEI 285