Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., diaminopimelate epimerase from Magnetospirillum magneticum AMB-1

 Score =  170 bits (431), Expect = 3e-47
 Identities = 108/276 (39%), Positives = 145/276 (52%), Gaps = 11/276 (3%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           F KMHGLGNDF+V+D   + +  +PE +R +A R TGVG DQL+V+    DP +D    I
Sbjct: 8   FLKMHGLGNDFVVLDARARALDLTPERVRAIASRGTGVGCDQLVVMTQATDPCADATMLI 67

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 124
           +NADGSEV  CGN +RC A  +  +   +K  +   TK G +         + V+MG   
Sbjct: 68  YNADGSEVAACGNASRCVAWLLMKEIAADK--VVFQTKAGLLDAESRGPHQVAVDMGPAR 125

Query: 125 FEPNKIPFRAKQSEKTYILRVGEHTLFCG-AVSMGNPHVVTVVDDIRTAAVETLGPLLES 183
            +  +IP    ++  T  L +    L     VSMGNPH V  VDD     +  LG  LE 
Sbjct: 126 LDWREIPL--AEAVDTLHLGISAGPLADPVGVSMGNPHAVFFVDDAEAVNLAQLGRGLEH 183

Query: 184 HERFPERVNAGFMQVVSRDE-----INLRVYERGAGETQACGSGACAAVAVGILQGLLDE 238
           H  FPER N    QV++  +     I +RV+ERGAG T ACG+GACA +     +GL   
Sbjct: 184 HALFPERANIEVAQVLTPPDAEMGRIRMRVWERGAGITMACGTGACATLVAAARRGLSPR 243

Query: 239 QVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
           +  + L GG L I W   G  L MTGP    + G +
Sbjct: 244 KAEIILDGGTLTIEWLKDGHVL-MTGPVAVAFTGTL 278