Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., diaminopimelate epimerase (VIMSS) from Escherichia coli BW25113

 Score =  443 bits (1139), Expect = e-129
 Identities = 212/270 (78%), Positives = 231/270 (85%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           FSKMHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYRI
Sbjct: 3   FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 124
           FNADGSEV QCGNGARCFARFVR+KGLTNK  I VST  G+MVL V ++DL+ VNMG P 
Sbjct: 63  FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122

Query: 125 FEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLESH 184
           FEP+ +PFRA ++EKTYI+R  E T+ CG VSMGNPH V  VDD+ TAAVETLGP+LESH
Sbjct: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182

Query: 185 ERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVHL 244
           ERFPER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV L
Sbjct: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242

Query: 245 PGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
           PGG L+I W+GPG PLYMTGPA H+YDG I
Sbjct: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272