Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., diaminopimelate epimerase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 95.9 bits (237), Expect = 8e-25
 Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 39/285 (13%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPE---LIRRLADRHTGVGFDQLLVVEAPYDPE 57
           M   F K  G GNDF+++D   ++  F  +   L+ +L DR  G+G D L+++       
Sbjct: 1   MEISFYKYQGTGNDFVMID--DRSAHFDEKNLKLVSQLCDRKFGIGADGLILIRNKEG-- 56

Query: 58  SDFHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLIT 117
            DF    +NADGS+   CGNGARC   F    G+  +   H     G     +E+ + I 
Sbjct: 57  YDFEMIYYNADGSQ-SMCGNGARCAVAFSSFLGIVTEEA-HFLAIDGPHDARIEDGN-IA 113

Query: 118 VNMGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETL 177
           + MG                + T I RV +       V+ G+PH V  V D+    V   
Sbjct: 114 LGMG----------------DVTAIERVDDDFY----VNTGSPHHVRFVKDVENYPVVDT 153

Query: 178 GPLLESHERF-PERVNAGFMQVVSRDEINLRVYERGA-GETQACGSGACA-AVAVGILQG 234
           G  +   + + P+  N  F+  ++ D I +R YERG   ET +CG+G  A A+  G  +G
Sbjct: 154 GASIRYSDHYTPKGTNVNFVSTLAEDHIYVRTYERGVEDETLSCGTGVTACALIYGDQKG 213

Query: 235 LLDEQVRVHLPGGELEIHWQ----GPGKPLYMTGPATHIYDGQIS 275
           +  + +++   GG L + ++    G    + + GPA  ++ G I+
Sbjct: 214 I--DHIKIKALGGNLAVKFKALPDGRFTNILLIGPAQQVFKGTIT 256