Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., diaminopimelate epimerase from Agrobacterium fabrum C58

 Score =  135 bits (339), Expect = 1e-36
 Identities = 94/280 (33%), Positives = 139/280 (49%), Gaps = 14/280 (5%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           F+KM+GL N  +VVD   +    +P     L + +    FDQ++ +  P    +D    I
Sbjct: 7   FAKMNGLANKILVVDMRGRKDMVTPAAAIAL-NSNPATQFDQIMAIHDPRVGGTDAFIDI 65

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 124
            N DG++ + CGNG RC  + +  +  T K +    T  G +     E+ +I+V+MG+P 
Sbjct: 66  LNCDGTKAQACGNGTRCVVQALSSE--TGKTSFTFQTVAGILNAVEHEDGMISVDMGLPR 123

Query: 125 FEPNKIPFRAKQSEKTYI-LRVGE---HTLFCGAV-SMGNPHVVTVVD-DIRTAAVETLG 178
           F  + IP   +  + + I L++G      L   AV SMGNPH +  VD D  T  +E  G
Sbjct: 124 FRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMTFDLERFG 183

Query: 179 PLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDE 238
           PLLE+H  FPE+ N    QV+S   +  R +ERGAG T ACGS ACA+       G    
Sbjct: 184 PLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAARTGRTGR 243

Query: 239 QVRVHLPGG----ELEIHWQGPGKPLYMTGPATHIYDGQI 274
           +V + +        L I W+     + MTGPA   + G +
Sbjct: 244 KVTIDVASSPVRVPLTIDWR-EDNHVVMTGPAEWEWSGSV 282