Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., Diaminopimelate decarboxylase from Xanthobacter sp. DMC5

 Score =  392 bits (1008), Expect = e-114
 Identities = 220/421 (52%), Positives = 279/421 (66%), Gaps = 7/421 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           M +F+Y+ +G+L AE V L  LA + GTP Y Y+ ATLERH+  F ++      L+CYA+
Sbjct: 1   MHHFDYR-NGRLHAEDVDLTSLAAEVGTPFYCYATATLERHYRVFMEAFAGRDVLLCYAL 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSN  V++TLARLG+G DIVS GEL R  AAG    ++VFSGVGKT  EM +AL   I
Sbjct: 60  KANSNQSVISTLARLGAGADIVSAGELMRARAAGVPGERIVFSGVGKTREEMAQALDAGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFNVESEPEL  L++VA   GVKAP+S+R+NPDVDAKTH  ISTG    KFGI   RA 
Sbjct: 120 LCFNVESEPELDALSEVALSKGVKAPVSIRVNPDVDAKTHKKISTGKSATKFGIPISRAR 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            VY  A  LP L + G+D HIGSQ+T +APF +A   L  L   L A G  + H+D+GGG
Sbjct: 180 DVYDFAARLPGLAISGVDMHIGSQITDMAPFENAVTLLAELARDLMAAGHRLHHMDLGGG 239

Query: 241 LGVVY--RDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           LGV Y   D +PP P+ YA+ ++ R      L L+FE GR + ANAG+LVT+V ++K  E
Sbjct: 240 LGVPYAASDPVPPSPAAYAE-VVGRALGDLKLPLVFEMGRMLVANAGILVTRVIYVKKGE 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIPL-RPRQGEAQTY-DLVGPVCETSDFLGKDRDL 356
            K F ++DAAMNDLIRP LY+A  DI+P+  P  G A    D+VGPVCET DFL  DR L
Sbjct: 299 GKTFVVVDAAMNDLIRPTLYEAHHDIVPVAEPAAGAAMVVADVVGPVCETGDFLALDRLL 358

Query: 357 -VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVL 415
             ++ GDLLAV ++GAYG   S  YNTR  V EV+V G +  +VR R + ++L AL+   
Sbjct: 359 PEVKPGDLLAVMTAGAYGAVQSGTYNTRALVPEVLVRGPEAAVVRPRVDPAALIALDRPA 418

Query: 416 P 416
           P
Sbjct: 419 P 419