Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., diaminopimelate decarboxylase from Rhizobium sp. OAE497

 Score =  404 bits (1039), Expect = e-117
 Identities = 214/419 (51%), Positives = 286/419 (68%), Gaps = 7/419 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           M++F Y+ DG L+AE VP+ D+A   GTP Y YS ATLERH+  F ++  D   ++CYA+
Sbjct: 1   MNHFEYR-DGILYAENVPVPDIAKAVGTPFYCYSTATLERHYRVFAEAFNDVDSMVCYAM 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSN  VL TL +LG+G D+VS GEL R LAAG   S+++FSGVGKT  EM  AL+  I
Sbjct: 60  KANSNQAVLKTLGKLGAGIDVVSEGELRRALAAGIPASRIMFSGVGKTPHEMDFALEAGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFNVESEPEL+ LN+ A + G KAP+S RINPDVDAKTH  ISTG ++NKFGI+++RA 
Sbjct: 120 YCFNVESEPELEILNQRAVKAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERAR 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            VY  A +LP ++V GID HIGSQ+T L PF DA   L  L+D+L+ +G  I H+D+GGG
Sbjct: 180 AVYARAATLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVDTLRGDGHDIHHVDIGGG 239

Query: 241 LGVVYRDE--LPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           LG+ Y+D+   PP P  YA  + ++L R  + +++ EPGR I  NAG+LVT+V ++K   
Sbjct: 240 LGIPYKDDNNPPPLPDAYAAIVKNQL-RSLNCKIVTEPGRLIVGNAGILVTEVLYVKDGG 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTY--DLVGPVCETSDFLGKDRDL 356
            K F I+D AMNDLIRP LY+A+ +I P+      A     D+VGPVCET D+L  DR++
Sbjct: 299 EKTFVIVDGAMNDLIRPTLYEAYHEIKPVVISAANAPRIKADIVGPVCETGDYLALDREM 358

Query: 357 VL-QEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESV 414
            + + GDL AV S GAYG   +  YN+R  V EV+V G++ +++R R     L  L+SV
Sbjct: 359 AMPKPGDLFAVMSGGAYGAVQAGTYNSRLLVPEVLVKGSEFHVIRPRRTYEELIGLDSV 417