Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., diaminopimelate decarboxylase from Magnetospirillum magneticum AMB-1

 Score =  365 bits (937), Expect = e-105
 Identities = 199/419 (47%), Positives = 276/419 (65%), Gaps = 7/419 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSV--GDYPHLICY 58
           M++F+YQ +G+L+AE V +A +A + GTP Y YS ATL+RH+  F +++        IC+
Sbjct: 1   MNHFHYQ-NGELFAEDVAIARIAREVGTPFYCYSTATLQRHYTVFAEALKAAGLDATICF 59

Query: 59  AVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQL 118
           A KAN N+ V+ T A+LG+G D+VS GEL + LAAG   +++VFSGVGKT  E++ A+  
Sbjct: 60  AAKANPNMAVIRTFAQLGAGADVVSEGELRQALAAGVPAARIVFSGVGKTRHELEFAVAK 119

Query: 119 KIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDR 178
            I   NVESEPEL+ L+++A   G   PI++R+NPDVDA TH  I+TG ++NKFGI + R
Sbjct: 120 GIFQINVESEPELEMLSEIAAARGQVMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTR 179

Query: 179 AAQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVG 238
           A +VY  A +LP ++   I CHIGSQLT L PF +A  R+  L+  L+A+GI IR LD+G
Sbjct: 180 AREVYARAKALPGVEPVAIACHIGSQLTELTPFREAFLRVRDLVAMLRADGIDIRRLDLG 239

Query: 239 GGLGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           GGLGV Y DE PP+P+ YA+ +   L        +FEPGR +  NAG+LV+++  +K   
Sbjct: 240 GGLGVPYDDETPPEPAAYAEVIKATL-GDLGCRFVFEPGRLLVGNAGILVSRIIRVKEGS 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIPL-RPRQGEA-QTYDLVGPVCETSDFLGKDRDL 356
            + F I+DAAMNDL RP+LY A+  I P+  P+ G A    D+VGPVCET D   K R L
Sbjct: 299 TRTFLIVDAAMNDLARPSLYDAYHSIFPVAEPKAGAALAEVDVVGPVCETGDTFAKQRRL 358

Query: 357 -VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESV 414
             ++  DLLA  ++GAYG  MSS YNTRP + EV+V G    ++R R     + +LES+
Sbjct: 359 PPMRTDDLLAFGTAGAYGAAMSSTYNTRPLIPEVLVKGGDYAVIRVRPSYEDMRSLESL 417