Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., type III PLP-dependent enzyme from Dickeya dianthicola ME23

 Score =  189 bits (481), Expect = 1e-52
 Identities = 136/418 (32%), Positives = 208/418 (49%), Gaps = 29/418 (6%)

Query: 13  WAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTL 72
           + E+V +AD+A + GTP YVYS   L R      + +      + Y++KAN NL V+  L
Sbjct: 27  YIEEVAVADIAGRIGTPFYVYSARQLRRQLQQLRQQLPT-GIAVYYSLKANPNLSVVRVL 85

Query: 73  ARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQ 132
           A  G+G ++ S  EL+  LAAG  P  +++ G GK+   +K A+   I+   VES  EL 
Sbjct: 86  AEQGAGCEVCSPTELKTALAAGVSPQHILYVGPGKSLPALKFAIDCGIRAIVVESVAELD 145

Query: 133 RLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNL 192
            LN++A +      ++LRINPD  +     + +G +  +FG+T D    V    H  P++
Sbjct: 146 NLNQLAAQANTVQTVALRINPDFSSAHARLVMSG-KPTQFGMTLDTLDTVLTSLHRWPSV 204

Query: 193 DVHGIDCHIGSQLTALAPFIDATDRLLALIDSLK-AEGIHIRHLDVGGGLGVVYRD---- 247
            + G   ++G+++       D T  +L L  +L+    + +  +DVGGG GV Y      
Sbjct: 205 SLRGFHIYLGTRILNAQTIADNTRNILQLALNLRDTHQLTLDFVDVGGGFGVPYFPKEAP 264

Query: 248 -ELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIID 306
            +LP      A  + D L +  D ++I E GR + A AG+ VT+V  LK    K FA+ D
Sbjct: 265 LDLPALGEAVASIVADFLRQTADTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAVCD 324

Query: 307 ---------AAMNDLIR---PALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDR 354
                    A +N ++R   P L        PL+P       Y + GP+C  +D LG + 
Sbjct: 325 GGANCHSAAAGLNSMLRKNFPLLRLGDNVDRPLQP-------YQVSGPLCTPTDLLGDNV 377

Query: 355 DL-VLQEGDLLAVRSSGAYGFTMS-SNYNTRPRVAEVMVDGNKTYLVRQREELSSLWA 410
            L +L   DL+ +  SGAYG T S  ++ +     EVMVDG +  L+RQ E    L A
Sbjct: 378 LLPMLAVDDLIGIPHSGAYGLTASPGSFLSFGYPPEVMVDGRRLTLIRQPETTEQLLA 435