Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., diaminopimelate decarboxylase from Agrobacterium fabrum C58

 Score =  395 bits (1016), Expect = e-115
 Identities = 213/419 (50%), Positives = 286/419 (68%), Gaps = 7/419 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           M++F Y  DG L AE VP+ ++A   GTP YVYS ATLERH+  F  +  D   ++CYA+
Sbjct: 1   MNHFGYI-DGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAM 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSN  VL TLA+LG+G D+VS GEL R LAAG   S+++FSGVGKT AEM  AL+  I
Sbjct: 60  KANSNQAVLKTLAKLGAGIDVVSGGELRRALAAGVPASRIMFSGVGKTVAEMDYALEAGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFN+ESEPEL+ LN  A + G +A +S RINPDVDA+TH  ISTG ++NKFGI+++RA 
Sbjct: 120 YCFNIESEPELEVLNLRAVKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERAR 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            VY  A +LP ++V GID HIGSQ+T L PF DA   L  L++ L+ +G  I H+D+GGG
Sbjct: 180 AVYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVEVLRTDGHAISHVDIGGG 239

Query: 241 LGVVYRDE--LPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           LG+ YRD+   PP P  YA  + + L +  + +++ EPGR I  NAG+LVT+V ++K   
Sbjct: 240 LGIPYRDDNNPPPLPDAYAHIVKNEL-KSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGG 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIP-LRPRQGEAQ-TYDLVGPVCETSDFLGKDRDL 356
            K F I+D AMNDLIRP LY+A+  I P ++P +   +   D+VGPVCET D+L  DR++
Sbjct: 299 DKTFVIVDGAMNDLIRPTLYEAYHGIRPVVQPSENAPRIKADIVGPVCETGDYLALDREM 358

Query: 357 VL-QEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESV 414
              Q GDL+AV S+GAYG   +  YN+R  V EV+V G++ +++R R     L AL+SV
Sbjct: 359 AAPQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRGTYEELIALDSV 417