Pairwise Alignments

Query, 205 a.a., cytochrome c4 from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 25/176 (14%)

Query: 32  CAACHGADGNSPLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSD 91
           CA CHG+D       +P L  +   +L     E    + + G+ G   P+ +A+    + 
Sbjct: 143 CAQCHGSDARGSKG-FPDLTDKD--WLYGGTPERITESITKGRVGVMPPMAAAVG---TS 196

Query: 92  EDIADLAAYYASMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPRGNGTELSGF 151
           +D+ ++A Y  S+  SG   P D V        AG      T C+ACHG  G G +  G 
Sbjct: 197 DDVKNVANYVLSL--SGE--PHDSVR-------AGLGKSKFTVCVACHGVGGVGNQTLGA 245

Query: 152 PKISGQ---HADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGL 204
           P +S +   H     A ++   SG R N+M    R    +LT+A I +++ YV GL
Sbjct: 246 PNLSDKIWLHGYGEAAIIQMINSGKR-NEMPAQER----RLTEAQIRMVASYVWGL 296



 Score = 25.8 bits (55), Expect = 9e-04
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 25  GKAKSLTCAACHGADG 40
           GK+K   C ACHG  G
Sbjct: 222 GKSKFTVCVACHGVGG 237