Pairwise Alignments

Query, 205 a.a., cytochrome c4 from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 20/176 (11%)

Query: 32  CAACHGADGNSPLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSD 91
           C+ CHG+D       +P L     ++  +   E        G+ G    VM A A  + D
Sbjct: 157 CSVCHGSDAKGAFG-FPNLTDNDWRWGGEP--ETIKTTIMAGRHG----VMPAWAEVIGD 209

Query: 92  EDIADLAAYYASMPISGNTTPEDV---VAQGKVLYTAGDASRGLTACIACHGPRGNGTEL 148
           + +AD+AA+  S  + G T PE     V  G+ ++ A         C+ACHGP G GT  
Sbjct: 210 QGVADVAAFVVSK-LDGRTLPEGAKADVENGQKIFAAN--------CVACHGPEGKGTPA 260

Query: 149 SGFPKISGQHADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGL 204
            G P ++   A    +   + +   R     +M      +  D  + +L+ YV  L
Sbjct: 261 MGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGND-KVHLLAAYVYSL 315



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 18  AQGSIEAG-KAKSLTCAACHGADG-NSPLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQ 75
           A+  +E G K  +  C ACHG +G  +P    P L             +L+      G+Q
Sbjct: 232 AKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQ-QTIRYGRQ 290

Query: 76  GRYDPVMSAMAMPLSDEDIADLAAYYASM 104
           G+    M A      ++ +  LAAY  S+
Sbjct: 291 GQ----MPAQEQLQGNDKVHLLAAYVYSL 315