Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 925 a.a., DNA polymerase I from Rhodanobacter sp000427505 FW510-R12

 Score =  974 bits (2518), Expect = 0.0
 Identities = 499/933 (53%), Positives = 659/933 (70%), Gaps = 18/933 (1%)

Query: 9   LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGKT 68
           LILIDGSSYLYRAFHA P   +    PT A++GVVNM+R+ ++    D +A + DA G T
Sbjct: 4   LILIDGSSYLYRAFHALPPLSNARGEPTGALFGVVNMLRATLKA-NPDYLAFVSDAPGPT 62

Query: 69  FRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQA 128
           FRD +YD+YKA+RPPMP+ELR QVEP+   + A+G P+L ++GVE DDVIGTLA QA   
Sbjct: 63  FRDALYDRYKANRPPMPEELRSQVEPMLATVGALGFPILRVDGVEGDDVIGTLALQAQAL 122

Query: 129 GMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKVD 188
           G+ V +ST DKDMAQLV   +TL+NTMT    DR GV+ KFG+ PE IID+LAL GD +D
Sbjct: 123 GIEVEVSTSDKDMAQLVGPRVTLVNTMTGTTTDRAGVLAKFGVQPEQIIDFLALTGDAID 182

Query: 189 NIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLSYQ 248
           NIPGVP  G KTA   L     L+ + AN D+I      G K + + L        LS Q
Sbjct: 183 NIPGVPKCGPKTAAKWLAEYATLDGVIANADRI------GGK-IGESLRATLPQLPLSRQ 235

Query: 249 LATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADEQTKTS 308
           LATIK DV LE  P  L ++  D   L  LY +  FK+ L EL DG T         + +
Sbjct: 236 LATIKTDVALEFGPTDLTRREADTTLLRELYTRYEFKAALKEL-DGPTDAALPSPLGRGA 294

Query: 309 SVTVSTAATHAAAIPESPAAHIDRS-------QYQTILNEQDFQLWLEKLKQAELFAFDT 361
               +T A  +A     P +  +R         Y+ +  +     WLEKL+ AEL AFDT
Sbjct: 295 VGEGATGAHGSAEPSPQPLSRGERGFEFSAKGDYELVTTQAQLDAWLEKLRSAELIAFDT 354

Query: 362 ETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKAK 421
           ET ++D M A++VG+S AV  G+A Y+P+ HDY   P+QL+RD V+A LKP+ ED ++ K
Sbjct: 355 ETTSIDAMRADIVGLSLAVEPGKACYIPLDHDYPGVPKQLDRDSVLAALKPVFEDPARPK 414

Query: 422 VGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQV 481
           +GQ+ KYD ++++ YG+ ++G+RHD+ML+SYV+N+   +HDMDSLA ++L +  + +E+V
Sbjct: 415 LGQHAKYDINILSHYGIAVQGLRHDSMLESYVWNTTATRHDMDSLAKKYLGYDTVKYEEV 474

Query: 482 AGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVPV 541
           AGKG  Q++F+Q+ L+ A +YAAEDADVTLRLH  + P +     L +VY EIE+PLVPV
Sbjct: 475 AGKGAKQISFSQVDLDTACRYAAEDADVTLRLHHALWPKLVSVPSLRRVYEEIEIPLVPV 534

Query: 542 LSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMKL 601
           L+ +ER GV+ID   L  QSQ++  R+ +L+Q +Y LAG+ FNL SPKQLQ +LF+++ L
Sbjct: 535 LAEMERRGVLIDGDELRRQSQQLGKRMLELQQQSYALAGREFNLDSPKQLQAVLFDELHL 594

Query: 602 PVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRVH 661
               KTP+G PSTNEE L+ +A  + LP+++++YRGLAKL+STYTDKL  ++NP TGRVH
Sbjct: 595 EAKLKTPTGQPSTNEEALEAIADTHELPRLILDYRGLAKLRSTYTDKLSSIVNPRTGRVH 654

Query: 662 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMAH 721
           TSYHQ   ATGR+SS+DPNLQNIPVR EEGRRIRQAF+AP GW++MA DYSQIELRIMAH
Sbjct: 655 TSYHQGSVATGRISSSDPNLQNIPVRTEEGRRIRQAFIAPPGWRVMAADYSQIELRIMAH 714

Query: 722 LSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQ 781
           LSGD+ LL AFR+G D+H ATAAE+ G+  ++VS+ QRR AKA+NFGL+YGMSAFGLA+Q
Sbjct: 715 LSGDEGLLKAFREGGDVHRATAAEVFGLKPEEVSANQRRAAKAINFGLMYGMSAFGLARQ 774

Query: 782 LGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRR 841
           LG+ RGEA +YM +YF RYPGV  +M+ TR +A + GYVETIFGRRL+L  +TSRNA  R
Sbjct: 775 LGVDRGEASDYMARYFSRYPGVRAFMDATREQAHRDGYVETIFGRRLYLENLTSRNAGLR 834

Query: 842 KAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLSE 901
           + AERAA+NAPMQG+AADIIK+AM+ V  W+    D    +LMQVHDELVFEV+  ++  
Sbjct: 835 QGAERAAVNAPMQGSAADIIKRAMIGVAAWLADRDDAH--MLMQVHDELVFEVQAEAVDA 892

Query: 902 IESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           + + V + M  AA+LAVPL+ + G G NW++AH
Sbjct: 893 VRAAVNERMSGAAQLAVPLLVDVGVGANWDEAH 925