Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  849 bits (2194), Expect = 0.0
 Identities = 460/941 (48%), Positives = 625/941 (66%), Gaps = 27/941 (2%)

Query: 10  ILIDGSSYLYRAF----HAYPGTMSNGEI-PTNAIYGVVNMIRSMMRQFASDRMAVIFDA 64
           +L+DGSSYLYRAF     A   T+ +G +  T AI  ++NM++ + +   +D  A +FDA
Sbjct: 1   LLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMINMMQKLRKDVRADYAACVFDA 60

Query: 65  KGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQ 124
           KG TFRD +Y +YKA+R PMPD+LR Q+ P+H+V++ +G  +L + GVEADDVIGTLA  
Sbjct: 61  KGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIGTLAHL 120

Query: 125 ASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMG 184
           A+Q G+  +IS+GDKD++QLV+++IT+I+TM +   D  GV  +FG+PP L++DY  L+G
Sbjct: 121 AAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDVAGVTAEFGVPPSLMLDYQTLVG 180

Query: 185 DKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAK 244
           D+VDN+PGVP VG KTA   LQ  G LEAL A   +I        +     L + R    
Sbjct: 181 DQVDNVPGVPKVGPKTAVKWLQEYGSLEALVARAGEIKGAAGENLRNALDWLPKGR---- 236

Query: 245 LSYQLATIKCDVELEE------SPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGI 298
              +L TIK D +L++      S + +     D +AL +      FK  +  L       
Sbjct: 237 ---ELLTIKIDCDLQDHIEGLPSLEAITIAGQDSEALKAFGETYGFKGLVKSLTQHDVPP 293

Query: 299 VTADEQTKTSSVTVSTAATHAAAIPESP-----AAHIDRSQYQTILNEQDFQLWLEKLKQ 353
              +E +K  +     A   +  + + P     A      +Y T+L    F  WL++L+ 
Sbjct: 294 ERIEE-SKVKAAAKGKAGDGSPGLFDEPDLSGSAERTTNLRYDTLLTWDQFDSWLQRLQA 352

Query: 354 AELFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPL 413
           AEL A DTET +LD M A +VG+SF+V  GEAAY+P+ H   +AP+QL  D V+A+LKP 
Sbjct: 353 AELVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPEAPEQLPFDEVLAKLKPW 412

Query: 414 LEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQH 473
           LED +K K+GQ++KYD  V A +G+E++G  HDTMLQSYV   V   H + SLA R L  
Sbjct: 413 LEDPAKHKLGQHMKYDRHVFANHGIEVQGYVHDTMLQSYVLE-VHKPHGLASLAERHLGR 471

Query: 474 SCISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYRE 533
             I++E + GKG +Q+ F Q+ + +AA+Y+ ED+D TL +H+ + P ++ D KL  +Y E
Sbjct: 472 QGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQADEKLRFIY-E 530

Query: 534 IEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQT 593
           +E+     L RIER GV+ID   L+AQS E+  R+  LEQ AY +AGQPFNL SPKQL  
Sbjct: 531 LEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQPFNLGSPKQLGE 590

Query: 594 ILFEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMI 653
           I F+++ LPV++KT +G  ST+EEVL++LA DYPLP  ++E+R LAKLK TYTDKL ++ 
Sbjct: 591 IFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLAKLKGTYTDKLAQLA 650

Query: 654 NPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQ 713
            P TGRVHT Y QAV  TGRLSS DPNLQNIP+R  EGRR+R+AFVAP G  I + DYSQ
Sbjct: 651 LPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGSVIASADYSQ 710

Query: 714 IELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGM 773
           IELRIMAH+SGD+ALL AF +G D+H ATAAE+ GV   QVSSEQRR AK +NFGLIYGM
Sbjct: 711 IELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRYAKVINFGLIYGM 770

Query: 774 SAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEI 833
            +FGLAK LGI    A+ Y+ +YFER+ GV +YM++TR RA  +GY+ET+FGRRL LP+I
Sbjct: 771 GSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIETVFGRRLVLPDI 830

Query: 834 TSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFE 893
            +    +  A ER AINAPMQGTAAD+IK +M+ V + ++ E     K++MQVHDELVFE
Sbjct: 831 KNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALD-EQRRSTKMIMQVHDELVFE 889

Query: 894 VKESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           V E  +  +++++  LM   A L VPL+AE G G NW++AH
Sbjct: 890 VPEGEVDWLKTEIPHLMAGVAALKVPLLAEVGVGPNWDKAH 930