Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 931 a.a., DNA polymerase I from Magnetospirillum magneticum AMB-1

 Score =  734 bits (1894), Expect = 0.0
 Identities = 417/937 (44%), Positives = 566/937 (60%), Gaps = 31/937 (3%)

Query: 11  LIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGKTFR 70
           LIDGS +++RAFH  P        P NA+YG   M+  ++   +SD +AVIFD+  KTFR
Sbjct: 13  LIDGSGFIFRAFHGLPPMTRADGTPVNAVYGFTTMLMKLLADSSSDHVAVIFDSSRKTFR 72

Query: 71  DEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQAGM 130
             +Y +YKAHRPP P+EL  Q   + +  RA  LP + +EG EADD+I T AR A +AG 
Sbjct: 73  SAIYPEYKAHRPPAPEELVPQFPLVREATRAFDLPAIELEGFEADDLIATYARLAVEAGA 132

Query: 131 PVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKVDNI 190
            V I + DKD+ QLV   + +I+ M N  +    V EKFG+ P+ ++D  AL GD  DN+
Sbjct: 133 RVTIVSSDKDLMQLVGPGVEMIDPMKNRTIGEAEVREKFGVSPDKVVDVQALCGDSSDNV 192

Query: 191 PGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLSYQLA 250
           PGVPG+G KTA  L++  G L+ L A   +I     R S      L  N   A++S +L 
Sbjct: 193 PGVPGIGVKTAAQLIEEYGDLDTLLARASEIKQPKRRES------LIANADLARISRELV 246

Query: 251 TIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADEQTKTSSV 310
            ++ D  +      L  + P  + L +      F+S +  L      I TA   T T +V
Sbjct: 247 RLRTDAPVPVPLSELDVKPPAPEKLAAFCAAQGFRSLMGRL---NAKIPTA-APTATRAV 302

Query: 311 TVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFDTETDNLDYMV 370
             + A   A ++P         + Y+ + +    + W+       L  FDTET  LD + 
Sbjct: 303 LPTEAPAEAPSLPPKV-----ETAYELVTDLAALENWIALATGGGLVGFDTETTGLDPLR 357

Query: 371 ANLVGMSFAVAEGEAAYLPVAH-------DYL-----DAPQQLERDWVIAQLKPLLEDES 418
           A LVG+S AVA G A Y+PV H       D L     DAPQ +     +A+LKPLL D S
Sbjct: 358 ARLVGVSLAVAPGRACYIPVLHAPAQAQGDLLGGPSTDAPQIIPAAETLARLKPLLADPS 417

Query: 419 KAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISF 478
             KVG N+KYD  VMA  G+ +     DTML SY  +     H +D L L  L H+ I F
Sbjct: 418 VLKVGHNIKYDMQVMAMQGLAVEPF-DDTMLLSYALDGASHGHGLDELCLLHLGHANIPF 476

Query: 479 EQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPL 538
            +V G G+NQ+TF+++ L++A  YAAEDAD+TLRLH  + P +  + ++  VY  +E PL
Sbjct: 477 SEVCGSGRNQVTFDRVPLDKARDYAAEDADMTLRLHALLKPRLLSE-RMVSVYETLERPL 535

Query: 539 VPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELA-GQPFNLSSPKQLQTILFE 597
           VPV++ +ER G+ +D   L A S++   RL +LE     L  G+ FNL SP+QL  +LFE
Sbjct: 536 VPVIAAMERDGIKVDRAQLMALSEDFGRRLTELETEVIALNNGEAFNLGSPQQLGKVLFE 595

Query: 598 QMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPST 657
            + LP  +KT +G  +T  +VL+ELA  + LP  L+++R L+KLK TYTD L   INP+T
Sbjct: 596 TLNLPGGKKTKTGQWATGADVLEELAPLHALPARLLDWRQLSKLKGTYTDALVAQINPAT 655

Query: 658 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELR 717
           GRVHTSY  A T TGRLSS+DPNLQNIP+R EEGR+IR AFVA  G K+++ DYSQIELR
Sbjct: 656 GRVHTSYSLAATTTGRLSSSDPNLQNIPIRTEEGRKIRHAFVAEPGKKLVSADYSQIELR 715

Query: 718 IMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFG 777
           ++AH++    L DAF  G DIHA TA+++ GVP+D +    RRRAKA+NFG+IYG+SAFG
Sbjct: 716 LVAHVAEIAGLRDAFAHGADIHAITASQVFGVPLDGIDPALRRRAKAINFGIIYGISAFG 775

Query: 778 LAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRN 837
           LA QLGIP+GEA+ Y++ YF RYP +  YME T+  A   G+V T+FGR++  P I  +N
Sbjct: 776 LAAQLGIPQGEAKAYIEAYFARYPEIRAYMERTKEEARDQGFVTTLFGRKVFTPGIKDKN 835

Query: 838 AMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKES 897
              R  AERAAIN P+QG AADIIK+AM+ +   +   G    +LL+QVHDELV E  E+
Sbjct: 836 GAMRAFAERAAINGPIQGGAADIIKRAMIRLPAALAAAGLS-ARLLLQVHDELVLEAPEA 894

Query: 898 SLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
                 + V+Q+ME+AA L+VPL+ EAG  D W  AH
Sbjct: 895 EADATVAVVKQVMEAAASLSVPLLVEAGIADTWGAAH 931