Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 933 a.a., DNA polymerase I from Serratia liquefaciens MT49

 Score = 1218 bits (3152), Expect = 0.0
 Identities = 615/938 (65%), Positives = 755/938 (80%), Gaps = 9/938 (0%)

Query: 1   MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV 60
           MA I +NPLIL+DGSSYLYRA+HA+P   ++   PT A+YGV+NM+RS++ Q+    +AV
Sbjct: 1   MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV 60

Query: 61  IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT 120
           +FDAKGKTFRDE++ +YK+HRPPMPD+LR Q+EPLH++++AMGLPLL   GVEADDVIGT
Sbjct: 61  VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLVTPGVEADDVIGT 120

Query: 121 LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL 180
           LA +A +AG  VLISTGDKDMAQLV  N+TLINTM N +L  + V +K+GIPPELIID+L
Sbjct: 121 LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL 180

Query: 181 ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR 240
           ALMGD  DNIPGVPGVGEKTA ALLQG+GGL+ALYANLD IA L FRG+KTMA KLE+N+
Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALYANLDSIATLSFRGAKTMAAKLEQNK 240

Query: 241 GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVT 300
             A LSY+LATIK DVEL+ +   L     D D L  L+ +  FK WL ++ + G  +  
Sbjct: 241 EVAYLSYKLATIKTDVELDLTCADLEVSALDVDVLQQLFKQYEFKRWLADV-EAGIWL-- 297

Query: 301 ADEQTKTSSVTVSTA--ATHAAAIPESPAAHIDRSQ--YQTILNEQDFQLWLEKLKQAEL 356
             E  K + V  ++A  AT  AA+ +   A    SQ  Y TIL+E  F  WLEKLK+AE+
Sbjct: 298 --EGKKGAGVKAASAPKATAVAAVTDKAPAEATLSQEGYVTILDEDTFAQWLEKLKKAEV 355

Query: 357 FAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLED 416
           FAFDTETD LD + ANL+G+SFA+A GEAAYLPVAHDYLDAP QL+RD+V+A LKPLLED
Sbjct: 356 FAFDTETDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPAQLDRDYVLATLKPLLED 415

Query: 417 ESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCI 476
           E   KVGQNLK+D  ++ARY + LRGI  DTML+SYV +SVGG+HDMDSL+ R+L H  +
Sbjct: 416 EKALKVGQNLKFDMGLLARYDITLRGIAFDTMLESYVLDSVGGRHDMDSLSDRYLGHKTV 475

Query: 477 SFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEM 536
           +FE++AGKGK QLTFNQIALE+AA YAAEDADVTL+LH  + P +++ A+L +V+ EIEM
Sbjct: 476 TFEEIAGKGKKQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKESAELLKVFNEIEM 535

Query: 537 PLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILF 596
           PL+PVLS IERTGV+ID  +L+  S E+  RL +LE  A+ELA +PFNL+S KQLQ IL+
Sbjct: 536 PLLPVLSHIERTGVLIDQSILATHSIELTKRLAELEIQAHELAEEPFNLASTKQLQAILY 595

Query: 597 EQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPS 656
           E+ KLPVL+KTP G PSTNEEVL ELALDYPLPKV++EYRGLAKLK+TYTDKLP MINP 
Sbjct: 596 EKQKLPVLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPV 655

Query: 657 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIEL 716
           +GRVHTSYHQAVTATGRLSS+DPNLQNIPVRN+EGRRIRQAF+AP G++I+A DYSQIEL
Sbjct: 656 SGRVHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYSQIEL 715

Query: 717 RIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAF 776
           RIMAHLS D+ LL AF  G+DIH ATAAE+ G+P+D+V+ EQRR AKA+NFGLIYGMSAF
Sbjct: 716 RIMAHLSQDEGLLKAFAAGEDIHRATAAEVFGLPLDKVTHEQRRSAKAINFGLIYGMSAF 775

Query: 777 GLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSR 836
           GLA+QLGIPRGEAQ YMD YFERYPGV++YME TR +AA  GYV T+ GRRL+LP+++S 
Sbjct: 776 GLARQLGIPRGEAQRYMDLYFERYPGVLEYMERTRQQAASQGYVSTLDGRRLYLPDVSSS 835

Query: 837 NAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKE 896
           N MRRKAAERAAINAPMQGTAADIIK+AM+ VD W++ + +  V+++MQVHDELVFEV E
Sbjct: 836 NGMRRKAAERAAINAPMQGTAADIIKRAMIEVDAWLQAQEEPLVRMIMQVHDELVFEVHE 895

Query: 897 SSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           S L     ++++LME++  LAVPL  + G G NW++AH
Sbjct: 896 SVLETSNQRIRELMENSMTLAVPLKVDVGVGANWDEAH 933