Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 928 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1197 bits (3098), Expect = 0.0
 Identities = 602/938 (64%), Positives = 734/938 (78%), Gaps = 14/938 (1%)

Query: 1   MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV 60
           M  IP+NPLIL+DGSSYLYRA+HA+P   ++   PT A+YGV+NM+RS++ Q+     AV
Sbjct: 1   MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV 60

Query: 61  IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT 120
           +FDAKGKTFRDE+++ YK+HRPPMPD+LR Q+EPLH +++AMGLPLLA+ GVEADDVIGT
Sbjct: 61  VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120

Query: 121 LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL 180
           LAR+A + G PVLISTGDKDMAQLV  NITLINTMTN +L  + V+ K+G+PPELIID+L
Sbjct: 121 LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL 180

Query: 181 ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR 240
           ALMGD  DNIPGVPGVGEKTA ALLQG+GGL+ LYA  +KIA L FRG+KTMA KL +N+
Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK 240

Query: 241 GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDG----GT 296
             A LSY+LATIK DVELE + + L  Q P  D L+ L+ K  FK W  ++  G      
Sbjct: 241 DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK 300

Query: 297 GIVTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAEL 356
           G   A +  +T  +  S         P  PAA +    Y TIL++   + W+EKLK+A +
Sbjct: 301 GAKPAAKPQETVVIDES---------PSEPAAALSYENYVTILDDVTLESWIEKLKKAPV 351

Query: 357 FAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLED 416
           FAFDTETD+LD + ANLVG+SFA+  G AAY+PVAHDYLDAP Q+ R   +  LKPLLED
Sbjct: 352 FAFDTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLED 411

Query: 417 ESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCI 476
           E   KVGQNLKYD  V+  YG+ELRGI  DTML+SY+ NSV G+HDMDSL+ R+L+H  I
Sbjct: 412 EKVRKVGQNLKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTI 471

Query: 477 SFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEM 536
           +FE +AGKGKNQLTFNQIALEEA +YAAEDADVTL+LH ++ P ++Q      V+  IEM
Sbjct: 472 TFEDIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEM 531

Query: 537 PLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILF 596
           PLVPVLSR+ER GV ID  +L   S+EI LRL +LE+ A+++AG+ FNLSS KQLQTILF
Sbjct: 532 PLVPVLSRVERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILF 591

Query: 597 EQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPS 656
           E+  +  L+KTP G PST+EEVL+ELALDYPLPKV++EYRGLAKLKSTYTDKLP MINP 
Sbjct: 592 EKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPK 651

Query: 657 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIEL 716
           TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAF+AP  + I++ DYSQIEL
Sbjct: 652 TGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIEL 711

Query: 717 RIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAF 776
           RIMAHLS D+ LL AF +GKDIH ATAAE+ G+P+D V+ EQRR AKA+NFGLIYGMSAF
Sbjct: 712 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAF 771

Query: 777 GLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSR 836
           GL++QL IPR EAQ+YMD YFERYPGV++YME TR++A + GYVET+ GRRL+LP+I S 
Sbjct: 772 GLSRQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSS 831

Query: 837 NAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKE 896
           NA RR  AERAAINAPMQGTAADIIK+AM+ VD W++ E   RV+++MQVHDELVFEV +
Sbjct: 832 NAARRAGAERAAINAPMQGTAADIIKRAMIAVDAWLQAE-QPRVRMIMQVHDELVFEVHK 890

Query: 897 SSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
             L  +  ++ QLME+   + VPL+ E G G+NW+QAH
Sbjct: 891 DDLDAVAKRIHQLMENCTRIDVPLLVEVGSGENWDQAH 928