Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 912 a.a., DNA polymerase I (EC 2.7.7.7) from Kangiella aquimarina DSM 16071

 Score = 1088 bits (2815), Expect = 0.0
 Identities = 557/932 (59%), Positives = 707/932 (75%), Gaps = 31/932 (3%)

Query: 8   PLILIDGSSYLYRAFHAYP-GTMSNGE-IPTNAIYGVVNMIRSMMRQFASDRMAVIFDAK 65
           P IL+DGSSYL+RA+H      M+N + + T A++GV+NM++S++++F  + MAV+FDAK
Sbjct: 7   PFILVDGSSYLFRAYHVPQLQRMTNSKGMMTGAVFGVINMLKSLIKEFEPEHMAVVFDAK 66

Query: 66  GKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQA 125
           GKTFR+++Y +YKA+RPPMP++LR Q+EP+H++++AMGLPLL IEGVEADDVIGTLA+QA
Sbjct: 67  GKTFRNDLYPEYKANRPPMPEDLRQQIEPIHEIVKAMGLPLLVIEGVEADDVIGTLAKQA 126

Query: 126 SQAGMPVLISTGDKDMAQLVDDNITLINTM--TNVVLDREGVIEKFGIPPELIIDYLALM 183
              G   LISTGDKDMAQLV +++TLINTM   N + DRE V+EKFG+ PE IIDYLAL+
Sbjct: 127 CNEGRETLISTGDKDMAQLVSEHVTLINTMDKNNPITDRERVVEKFGVKPEQIIDYLALV 186

Query: 184 GDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNA 243
           GDKVDNIPGV   G KTA   L+    L+ +  + D+I      G K + + L E     
Sbjct: 187 GDKVDNIPGVDKCGPKTAVKWLEQYDSLQGVIDHADEI------GGK-IGENLREAIDRL 239

Query: 244 KLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELL-DGGTGIVTAD 302
            LSY+LATIK D ELE  P  L    PD   L  LYG++ FK WLTE+L + G G    D
Sbjct: 240 PLSYELATIKLDCELEYKPGELNIGNPDHKELKKLYGEMEFKRWLTEVLKELGEG----D 295

Query: 303 EQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFDTE 362
           E ++                 ES  A +DRS+Y+TIL +QD   W++KLK+AELF+FDTE
Sbjct: 296 ESSQDGE-------------SESGVALVDRSKYETILEQQDLDKWIQKLKEAELFSFDTE 342

Query: 363 TDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKAKV 422
           T +L+Y+ A LVGMSF +  GEAAYLPVAH Y+ AP+QL+R  V+ +L+PLLE E   KV
Sbjct: 343 TTSLNYIEAELVGMSFGLDNGEAAYLPVAHSYMGAPKQLDRGEVLEKLRPLLESEKHKKV 402

Query: 423 GQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQVA 482
           GQNLKYD SV+A YG+EL GI  DTML+SY  NSV  +HDMD+LAL  L H  I FE++A
Sbjct: 403 GQNLKYDMSVLANYGIELGGIEFDTMLESYCLNSVASRHDMDTLALHHLNHVNIKFEEIA 462

Query: 483 GKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVPVL 542
           GKGKNQLTF+QI +E+AA YAAEDAD+T+RLHQ++ P +++     QV+  IEMPL+ VL
Sbjct: 463 GKGKNQLTFDQIEIEQAAPYAAEDADITMRLHQKLWPELKESEGPTQVFEHIEMPLLRVL 522

Query: 543 SRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMKLP 602
           S++ER GV++D  LL  +S     RL +LE+ A+E+AG+ FNL SPKQLQ+I +E++ LP
Sbjct: 523 SKVERNGVLVDGKLLLEKSHLFEKRLKELEKEAFEIAGKEFNLGSPKQLQSIFYEELGLP 582

Query: 603 VLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRVHT 662
           +L+KTP G PST EEVLQELALDYPLPK+++E+R L+KLKSTYTDKLP+MIN  TGRVHT
Sbjct: 583 ILKKTPKGQPSTAEEVLQELALDYPLPKLILEHRSLSKLKSTYTDKLPQMINDKTGRVHT 642

Query: 663 SYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMAHL 722
           SYHQAV ATGRLSSTDPNLQNIP++ EEGR IR AF+AP G KI+A DYSQIELRIMAHL
Sbjct: 643 SYHQAVAATGRLSSTDPNLQNIPIKTEEGRSIRTAFIAPKGHKILAADYSQIELRIMAHL 702

Query: 723 SGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQL 782
           S D+ LL AF +G D+H+ATAAE+  VP+++V+S QRR AKA+NFGLIYGMSAFGLAKQ+
Sbjct: 703 SQDKGLLKAFEEGLDVHSATAAEVFDVPLEEVTSNQRRNAKAINFGLIYGMSAFGLAKQI 762

Query: 783 GIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRRK 842
              R  AQ+Y++ YF RYPGV  YME TR +AA LGYVET++GRRL+LPEI S+N MRRK
Sbjct: 763 DTDRNTAQDYINTYFARYPGVETYMESTRQKAADLGYVETLYGRRLYLPEIHSKNGMRRK 822

Query: 843 AAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLSEI 902
           AAER AINAPMQG+AADIIK AML VD+W++      +K++MQVHDELVFEV+ES L   
Sbjct: 823 AAERTAINAPMQGSAADIIKLAMLEVDKWLQDVKG--IKMIMQVHDELVFEVEESQLELA 880

Query: 903 ESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           + K+ +LMES AEL+VPL+A+ G G+NWE+AH
Sbjct: 881 QKKIPELMESVAELSVPLIADVGIGENWEEAH 912