Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., 5'-3' exonuclease (including N-terminal domain of PolI) from Enterobacter asburiae PDN3

 Score =  115 bits (288), Expect = 3e-30
 Identities = 75/259 (28%), Positives = 124/259 (47%), Gaps = 18/259 (6%)

Query: 9   LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFD--AKG 66
           L+++D  + L R  HA  GT              ++ +  ++R         +FD  A+ 
Sbjct: 5   LLIVDALN-LIRRIHAVQGTPCKDTC--------LHALEQLIRHSEPTHAVAVFDDEARN 55

Query: 67  KTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQAS 126
             +R +    YKA R PMP++L  ++  L       G+P    +G EADD+  TLA + +
Sbjct: 56  TGWRHQRLPDYKAGRAPMPNDLHAELPMLRAAFEQRGVPCWGAQGNEADDLAATLAVKVA 115

Query: 127 QAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDK 186
            AG    I + DK   QL+   I + +      LD   +  +FG+ PE + DY  L G  
Sbjct: 116 SAGYQATIVSTDKGYCQLLSPTIRIRDYFQKRWLDAPFIASEFGVSPEQLPDYWGLAGIS 175

Query: 187 VDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLS 246
              +PGV G+G K+A  LL     LE +YA LD++        +   +KLE ++  A + 
Sbjct: 176 SSKVPGVAGIGPKSAAQLLTDFQSLEGIYARLDEV-------PEKWRKKLEAHKEMAFIC 228

Query: 247 YQLATIKCDVELEESPQTL 265
            ++AT++ D++L+ + Q L
Sbjct: 229 REIATLQTDLQLDGNLQQL 247