Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 952 a.a., DNA polymerase I from Bacteroides stercoris CC31F

 Score =  679 bits (1752), Expect = 0.0
 Identities = 404/963 (41%), Positives = 584/963 (60%), Gaps = 54/963 (5%)

Query: 9   LILIDGSSYLYRAFHAY---PGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAK 65
           L L+D  + +YRA++A+   P   S G   T+AI G VN +  ++++     + V FD  
Sbjct: 7   LFLLDAYALIYRAYYAFIKNPRINSKG-FNTSAILGFVNTLEEVLKKENPTHIGVAFDPS 65

Query: 66  GKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQA 125
           G TFR E Y+QYKA R   P+ +R  V  +  +IRA  +P+L + G EADDVIGTLA +A
Sbjct: 66  GPTFRHEAYEQYKAQREETPEAIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGTLATEA 125

Query: 126 SQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIE---KFGIPP-ELIIDYLA 181
            + G+   + T DKD  QLV +N+ +     +   +  G+ E   KF I   E +ID L 
Sbjct: 126 GRQGIVTYMMTPDKDYGQLVSENVFMYRPKHSGGFEVMGIEEIKAKFDIQSTEQVIDMLG 185

Query: 182 LMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRG 241
           LMGD  DNIPG PGVGEKTA  L+   G +E L A+ D++          +  K+E NR 
Sbjct: 186 LMGDSSDNIPGCPGVGEKTAQKLVAEFGSIENLLAHTDRLKG-------ALKTKVEANRE 238

Query: 242 NAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDG-GTGIVT 300
               S  LATIK DV ++    TL+++ P+ + L  ++ +L F++ +  +L   G+ + +
Sbjct: 239 MIAFSKFLATIKVDVPIKLDMNTLVREEPNEEELRKIFEELEFRTLIDRVLKKTGSPLPS 298

Query: 301 ADEQ--------TKTSSVTVSTAATHAAAIPESPAAHIDRS------------------Q 334
           +           T  +  T  T + + A +     A+   +                   
Sbjct: 299 SSNSASPDPYAGTLFAQPTDGTTSGNNAPVQGDLFANFADNGTGDAKNSILTRLEMFDVD 358

Query: 335 YQTILNEQDFQLWLEKLKQAELFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDY 394
           YQ I  E+  +  ++KL   E+ + DTET   + M A LVGMSF+ AE +A Y+PV  + 
Sbjct: 359 YQLIDTEEKRKKIIQKLLTKEILSIDTETTGTEPMEAELVGMSFSDAENQAYYVPVPANR 418

Query: 395 LDAPQQLERDWVIAQLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVY 454
            +A +      ++ + +PL E+E+  KVGQN+KYD  V+  YGV+++G   DTML  YV 
Sbjct: 419 DEALK------IVNEFRPLYENENSMKVGQNIKYDMIVLQNYGVQVKGKLFDTMLAHYVL 472

Query: 455 NSVGGKHDMDSLALRFLQHSCISFEQVAG-KGKNQLTFNQIALEEAAQYAAEDADVTLRL 513
                +H+MD LA  +L +  I  +++ G KGKNQ     +  E+  +YA EDADVTL+L
Sbjct: 473 QPEL-RHNMDYLAEIYLHYQTIHIDELIGAKGKNQKNMRDLPPEDVYRYACEDADVTLKL 531

Query: 514 HQRIHPLIEQDAKLEQVYREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQ 573
              +   +++ A  E ++ EIEMPLVPVL  IE  GV ID   L   S+   LRL ++E+
Sbjct: 532 KNVLEKELKEHAA-EHLFYEIEMPLVPVLVNIESNGVRIDTEALKQSSEHFTLRLQEIEK 590

Query: 574 NAYELAG-QPFNLSSPKQLQTILFEQMKL-PVLQKTPSGTPSTNEEVLQELALDYPLPKV 631
             Y LAG + FN+ SPKQ+  +LF+++K+    +KT +G   T+EEVL+ L   + +   
Sbjct: 591 EIYALAGGETFNIGSPKQVGEVLFDRLKIVEKAKKTKTGQYVTSEEVLESLRNKHAIIGK 650

Query: 632 LIEYRGLAKLKSTYTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEG 691
           ++EYRGL KL STY D LP++INP TGR+HTS++QAVTATGRLSS++PNLQNIP+R+E+G
Sbjct: 651 ILEYRGLKKLLSTYIDALPQLINPRTGRIHTSFNQAVTATGRLSSSNPNLQNIPIRDEDG 710

Query: 692 RRIRQAFVAPHGWKIMAVDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPI 751
           + IR+AF+   G +  + DYSQIELRIMAHLS D+ ++DAF  G DIHAATAA+I  V I
Sbjct: 711 KEIRKAFIPDDGCEFFSADYSQIELRIMAHLSQDKNMIDAFLSGYDIHAATAAKIYKVDI 770

Query: 752 DQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTR 811
           + V+++ RR+AK  NFG+IYG+S FGLA+++ +PR EA+E +D YFE YP V +YM+ + 
Sbjct: 771 NDVTADMRRKAKTANFGIIYGISVFGLAERMNVPRQEAKELIDGYFETYPQVKEYMDRSI 830

Query: 812 SRAAQLGYVETIFGRRLHLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEW 871
             A + GYVETIF R+  LP+I SRNA+ R  AER AINAP+QG+AADIIK AM L+ + 
Sbjct: 831 QVARENGYVETIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMSLIYQR 890

Query: 872 IEREGDGRVKLLMQVHDELVFEVKESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWE 931
           ++   + + K+++QVHDEL F V E+    I+  V + ME A  + VPL A+ G G NW 
Sbjct: 891 LQ-SNNLKAKMILQVHDELNFSVPEAEKEIIQKIVIEEMERAYRMLVPLKADFGWGKNWL 949

Query: 932 QAH 934
           +AH
Sbjct: 950 EAH 952