Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 974 a.a., DNA polymerase I from Azospirillum sp. SherDot2

 Score =  754 bits (1947), Expect = 0.0
 Identities = 429/961 (44%), Positives = 601/961 (62%), Gaps = 52/961 (5%)

Query: 9   LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGKT 68
           L L+DGS +++RAFHA P        P NA+ G  NM+  ++    ++ +AV+FD+K   
Sbjct: 31  LYLVDGSGFIFRAFHALPMLTRPDGTPVNAVLGFSNMLLKLLADAKAEAVAVVFDSKRLN 90

Query: 69  FRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQA 128
           FR+E Y  YKAHRP  P+EL+ Q   + +   A  LP L +EG EADD+I T AR A +A
Sbjct: 91  FRNEFYPDYKAHRPEPPEELKPQFALIREATEAFCLPCLELEGFEADDLIATYARLAQEA 150

Query: 129 GMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKVD 188
           G PV I + DKD+ QLV   + + + M N  +  + V EKFG+PP+ ++D  AL GD VD
Sbjct: 151 GRPVTIVSSDKDLMQLVRPGVGMFDPMKNKAIGPDEVFEKFGVPPDKVVDVQALAGDSVD 210

Query: 189 NIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLSYQ 248
           N+PGVPG+G KTA  L+   G LEAL AN +KI     R      QKL E    A++S +
Sbjct: 211 NVPGVPGIGVKTAAQLITEYGDLEALLANAEKIKQPARR------QKLIEFADLARISRR 264

Query: 249 LATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTE----------LLDGGTGI 298
           L  +  +V   +    L  + PD   L+       F+S ++           + DG +G 
Sbjct: 265 LVLLDENVPPPKPLDDLRVREPDHQRLIDFLRAQGFRSIVSRVEMEMQKDGRIADGASGS 324

Query: 299 VTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILN--EQDFQL---------W 347
           + A         ++ T A  + A  ESPAA  DR   +T+LN  E  ++L         W
Sbjct: 325 LPAPG-------SMPTPAAKSPATAESPAAE-DRPARKTVLNVPEVRYELVQDADALRRW 376

Query: 348 LEKLKQAELFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDA---------- 397
           +E+ ++  + A DTETD+L    A LVG+S +   G A Y+P+AH    A          
Sbjct: 377 VERARETGVLAVDTETDSLTPATATLVGVSLSTEPGIACYIPLAHKAEGAAAAGQLDFEA 436

Query: 398 ---PQQLERDWVIAQLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVY 454
              P Q+  D  +A LK +LED S  K+G N K+D  + AR G+ +  +  D+ML SYV 
Sbjct: 437 PTPPAQIPTDEAMAILKDVLEDRSVLKIGHNFKFDHQLFARNGIAVSPV-DDSMLISYVL 495

Query: 455 NSVGGKHDMDSLALRFLQHSCISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLH 514
                 H MD LA   L ++ I F++V G GKNQ+TF+++ L++A  YAAEDAD+TLRL 
Sbjct: 496 EGGSHGHGMDELAELHLAYTPIPFKEVCGTGKNQITFDRVPLDKALAYAAEDADITLRLW 555

Query: 515 QRIHPLIEQDAKLEQVYREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQN 574
             + P +  D ++  VY  ++ PLVPV++ +ER GV ID   LS  SQ ++LRL ++E++
Sbjct: 556 TLLKPRLVDD-RMVTVYETLDRPLVPVVADMERAGVHIDKKALSDLSQSLSLRLAEIEKD 614

Query: 575 AYELAGQPFNLSSPKQLQTILFEQMKLPVLQKTPSGTPSTNEEVLQELALD-YPLPKVLI 633
            + LAGQ FN+ SPKQL  ILF+ +KL   +K  +G  ST+  VL+ELA   + + + ++
Sbjct: 615 VHALAGQSFNIGSPKQLGEILFDTLKLGTGKKGKTGAYSTDSSVLEELAEQGHTIAQRVL 674

Query: 634 EYRGLAKLKSTYTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRR 693
           ++R LAKLKSTYTD L + I+P TGRVHT++  A T TGRLSSTDPNLQNIPVR EEG++
Sbjct: 675 DWRQLAKLKSTYTDALQEKISPVTGRVHTAFALAATNTGRLSSTDPNLQNIPVRTEEGKK 734

Query: 694 IRQAFVAPHGWKIMAVDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQ 753
           IR+AFVA  G+K+++VDYSQIELR++A ++  QAL DAFRDG DIHAATAA++ G+P++Q
Sbjct: 735 IRRAFVASPGYKLLSVDYSQIELRLVAEMANIQALKDAFRDGLDIHAATAAQVFGIPLEQ 794

Query: 754 VSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSR 813
           ++ + RR+AKA+NFG+IYG+S FGL +QLGI  GEA  ++  Y ER+  +  +ME T++ 
Sbjct: 795 MTPDIRRKAKAINFGIIYGISGFGLGRQLGIAPGEANAFIKTYLERFHELKVWMEATKAF 854

Query: 814 AAQLGYVETIFGRRLHLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIE 873
           A Q GYV T+FGRR ++P I  +NA RR  AER AINAP+QGTAADI+K+AM  +   + 
Sbjct: 855 ARQHGYVATLFGRRCYMPGIQEKNAARRAFAERQAINAPIQGTAADIMKRAMNRMPGALA 914

Query: 874 REGDGRVKLLMQVHDELVFEVKESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQA 933
             G    ++L+QVHDEL+FEV E+   +    V+++ME AA L VPLVAEAG GDNWE+A
Sbjct: 915 AAGSS-ARMLLQVHDELLFEVPEAEAEDAARIVREVMEGAATLGVPLVAEAGIGDNWEEA 973

Query: 934 H 934
           H
Sbjct: 974 H 974