Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 930 a.a., DNA polymerase I from Alteromonas macleodii MIT1002

 Score = 1151 bits (2977), Expect = 0.0
 Identities = 572/934 (61%), Positives = 724/934 (77%), Gaps = 7/934 (0%)

Query: 4   IPDN---PLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV 60
           +PD+   P IL+DGSSYL+RAFH  P   ++    T AIYGVVNM++S+++Q+    MAV
Sbjct: 1   MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV 60

Query: 61  IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT 120
           IFDAKGKTFRD++Y +YKA+RPPMPDELR Q+EPLH +I+AMGLP++   GVEADDVIGT
Sbjct: 61  IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIGT 120

Query: 121 LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL 180
           LA+ A++ G+  LISTGDKDMAQLV++++TLINTMTN ++D EGV  KFGIPPEL+ID+L
Sbjct: 121 LAKHATEKGIDTLISTGDKDMAQLVNEHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL 180

Query: 181 ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR 240
           AL GDKVDNIPGVPGVG+K+A ALL GIGG++ +Y NLDKIA L FRGSK+MA K++E  
Sbjct: 181 ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYKNLDKIADLSFRGSKSMAAKMQEYE 240

Query: 241 GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVT 300
             A+LSY LATI  D++L+   + L+    D + L  L+ +  FK W  E+    + ++ 
Sbjct: 241 EQARLSYTLATISIDLDLDYDVEALMPCQADNEQLRDLFAEYEFKRWHAEV----SALIA 296

Query: 301 ADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFD 360
             + +  ++ T    +  A    +S +  ID+S+Y+T+L+E+ F  W+ KL++AEL AFD
Sbjct: 297 GGDTSGANANTNEEKSDSAEESEQSESIEIDKSKYETVLDEERFNAWVAKLEKAELIAFD 356

Query: 361 TETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKA 420
           TET +L+YM A LVG+SF + EGEAAY+PVAHDY DAP QL R++V+  LKP+LE ++  
Sbjct: 357 TETTSLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPAQLSREFVLDALKPILESDTVI 416

Query: 421 KVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQ 480
           KVGQ++KYD +V+A Y + L GI  DTML+SYV NS   +HDMDSLAL +L H  I FE+
Sbjct: 417 KVGQHIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEE 476

Query: 481 VAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVP 540
           +AGKG  QLTFNQI+LEEA  YAAEDAD+TLRLH  I   +++  +L+ +  ++E+PL  
Sbjct: 477 IAGKGAKQLTFNQISLEEAGPYAAEDADITLRLHNAIWTKLKEIPELKNLLIDVEVPLAC 536

Query: 541 VLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMK 600
           VLSR+E+ GV+ID   L  QSQ++A R+ +LE   +E AG+PFNL S KQLQ +LFE+M 
Sbjct: 537 VLSRMEQEGVLIDSQRLLQQSQDLATRIAELESEVHEEAGEPFNLGSTKQLQHVLFEKMS 596

Query: 601 LPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRV 660
           LP+++KTP G PST+E+VLQELAL+YPLPK ++EYRGL KLK+TYTDKLPKMIN  TGRV
Sbjct: 597 LPIIKKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRV 656

Query: 661 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMA 720
           HTSYHQAVTATGRLSSTDPNLQNIP+RNEEGRR+RQAFV   G K +A DYSQIELRIMA
Sbjct: 657 HTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPREGNKFVAADYSQIELRIMA 716

Query: 721 HLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAK 780
           HLSGD+ LLDAF  GKDIH ATAAE+ GVP+D+V++EQRR AKA+NFGLIYGMSAFGL+K
Sbjct: 717 HLSGDKGLLDAFAHGKDIHKATAAEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSK 776

Query: 781 QLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMR 840
           QL IPR EAQ+YMD YFERYPGV++YM+ TR  A   GYVET+FGRRL+LP+I + N  R
Sbjct: 777 QLNIPRNEAQKYMDLYFERYPGVLEYMDSTRESAKDKGYVETVFGRRLYLPDIKASNGAR 836

Query: 841 RKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLS 900
           RK AERAAINAPMQGTAADIIK AM+ VD+WI +     V ++MQVHDELVFE+KE  + 
Sbjct: 837 RKGAERAAINAPMQGTAADIIKMAMIKVDDWIRKNASDDVTMMMQVHDELVFEIKEDKVE 896

Query: 901 EIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
              S +  LMESAA L VPLV EAG G+NW++AH
Sbjct: 897 TYVSTITALMESAATLNVPLVVEAGVGENWDEAH 930