Pairwise Alignments

Query, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Uncharacterized metal-dependent hydrolase YcfH from Pseudomonas sp. S08-1

 Score =  134 bits (337), Expect = 2e-36
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 6/257 (2%)

Query: 1   MIDTHAHVYASEF---DHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCH 57
           ++D+H H+   +    D   D  +A AR  G++  L   +   +   + A  + Y D+  
Sbjct: 2   LVDSHCHLDRLDLAAHDGSLDAALAAARSRGVQHFLCIGVSAANAGAVKALAERYADVDC 61

Query: 58  SMMGLHPCYVDANVKQTLATIYEWFSRHTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLNW 117
           S+ G+HP  ++      L  +    +    +A+GE G+D +++      Q  +F   L  
Sbjct: 62  SV-GVHPLDLEKGETPALDWLLGELNHPNVVAIGETGLDYHYEPEAAELQRQSFNLHLEA 120

Query: 118 AKELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGIGGV 177
           AK    PV++HTR++  +TLALL++A   +  GV HCF    D AKA  D+GF++ + G+
Sbjct: 121 AKITGKPVIVHTREARADTLALLREAALPQA-GVLHCFTEDWDMAKAALDIGFYISLSGI 179

Query: 178 STFKNS-GMDQVIPQLDLNYVILETDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRSLPL 236
            TF+N+  + +V  ++  + +++ETD PYLAP+PHRGK N P     ++E +A +R    
Sbjct: 180 VTFRNADALREVARKVPADRLLVETDSPYLAPIPHRGKPNLPQYVREVAEFLAMVRGESF 239

Query: 237 GEVIKITNNNSKALFGL 253
             + + T  N K LF L
Sbjct: 240 EALAEQTTGNFKRLFPL 256