Pairwise Alignments

Query, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Putative deoxyribonuclease YjjV from Pseudomonas sp. S08-1

 Score =  145 bits (365), Expect = 1e-39
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 7/257 (2%)

Query: 1   MIDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCHSMM 60
           +IDTH H+   +FD DR E++AR+R  G+EK+++  +  ++   +    +    L ++  
Sbjct: 3   LIDTHTHLDFPDFDADRTELLARSRTAGVEKLVVLGVYRDNWQRLWDLVQCNEGL-YAAF 61

Query: 61  GLHPCYVDANVKQTLATIYEWFSRHT----FIAVGEIGIDLYWDKTFKAEQEMAFLTQLN 116
           GLHP Y+  +  + L  + EW  R        AVGE G+D Y +   +  Q+  F  QL 
Sbjct: 62  GLHPVYLQQHRPEHLDQLREWLQRLAGNPRLCAVGEFGLDYYVESLDREHQQQLFEAQLG 121

Query: 117 WAKELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGIGG 176
            A E +LP ++H R +   T+A LK+ +  R  GV H F GS +EA+    LGF LG+GG
Sbjct: 122 LAAEFELPALLHVRRAHAATIATLKRYKLPR-GGVIHAFTGSYEEAREYIRLGFKLGLGG 180

Query: 177 VSTFKNS-GMDQVIPQLDLNYVILETDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRSLP 235
             T+  +  + +VIP+L L  ++LETD P +AP  H G RN P     I   +A+L  + 
Sbjct: 181 APTWPQALRLRKVIPRLPLEAIVLETDSPDMAPAMHPGVRNSPEHLPDICAALAELCGVT 240

Query: 236 LGEVIKITNNNSKALFG 252
             E+   ++ N+  LFG
Sbjct: 241 AEELAAASSRNAAELFG 257