Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  328 bits (840), Expect = 5e-94
 Identities = 185/362 (51%), Positives = 250/362 (69%), Gaps = 8/362 (2%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           + +  +V   +++GDLS  +      E  +L + +     +L +++ ++ +   TI  A+
Sbjct: 218 LGQAVQVAETVAAGDLSTNIKVESRDEAGQLMQALKNMNESLAKVVGEVRTGTETIATAS 277

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
            +I++GN DLSSRTE+QAS+LEQTA+SMEEL STV+QN+DNA QAN LA  A+E+A  GG
Sbjct: 278 GQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAMSASEVAVKGG 337

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
            ++ QVV TM SIN S++KI DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF+VVAS
Sbjct: 338 SVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 397

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVR+LAQRSA AAK+IK LI +SV K+  G++ V+ +G TM +IV S+KRV D+M +I +
Sbjct: 398 EVRNLAQRSAAAAKEIKTLIGNSVEKVEEGSKQVEEAGRTMDEIVGSVKRVTDIMGEITA 457

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQD 602
           AS EQ +GI ++NQA+ QMD+ TQQNAALVEEA+AA++SL  QA  L   V++F+L   D
Sbjct: 458 ASQEQTSGIEQINQAITQMDQATQQNAALVEEASAAAQSLQEQAGSLVQAVSVFKL---D 514

Query: 603 TSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAK---ITAKASSRAQPVMQVAHDE--EWE 657
            +A + ++    R    P T  PA   AK PAK      +    A P + +A D   +W 
Sbjct: 515 ANAVATVRPGFTRITPIPKTARPAPAAAKRPAKALPARREPGGAAAPQLAMAGDAKGDWT 574

Query: 658 SF 659
            F
Sbjct: 575 EF 576