Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  313 bits (803), Expect = 1e-89
 Identities = 184/354 (51%), Positives = 240/354 (67%), Gaps = 24/354 (6%)

Query: 309 VMTALSSGDLSAQLTHPFEGEFAELGEV---ISQFIVTLRQIITDINSVAATIKLAATEI 365
           V+  ++ GDLS  +    E + A  G +   I    + L  I+  I   +  I  A+ +I
Sbjct: 235 VVGRIADGDLSMAV----EADAAHEGSLLHSIKLMQLQLTSIVGKIKDSSDVIADASGQI 290

Query: 366 SNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELI 425
           ++GN DLSSRTEQQAS+LEQTA+SMEEL STV+QN+DNA QAN LA  A+E+A  GG ++
Sbjct: 291 ASGNQDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVV 350

Query: 426 EQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVR 485
            QVV TM SIN S++KI DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF+VVASEVR
Sbjct: 351 SQVVTTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR 410

Query: 486 SLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASA 545
           SLAQRSA AAK+IK LI DSV K++ G++ V+ +G TM +IV S++RV D+M +I +AS 
Sbjct: 411 SLAQRSAAAAKEIKTLIGDSVEKVAEGSKQVEEAGRTMDEIVGSVRRVTDIMGEITAASQ 470

Query: 546 EQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQDTSA 605
           EQ +GI ++NQA+ QMD++TQQNAALVEEA+AA++SL  QA  L   V+ F+L     +A
Sbjct: 471 EQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLVQAVSTFKLDASHQAA 530

Query: 606 PSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVAHDEEWESF 659
           P        R ++ P  +   +           K+S  A P + VA   +W  F
Sbjct: 531 P------RARAEALPAVQDDNN-----------KSSLPAAPQLAVAGAGDWREF 567