Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  315 bits (808), Expect = 3e-90
 Identities = 170/290 (58%), Positives = 220/290 (75%)

Query: 309 VMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNG 368
           V   +++GDLS  +      E  +L + +     +L +++ ++ +   TI  A+ +I++G
Sbjct: 225 VAETVAAGDLSVDIRAESRDETGQLMQALKNMNDSLAKVVGEVRTGTETIATASGQIASG 284

Query: 369 NTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQV 428
           N DLSSRTEQQAS+LEQTA+SMEEL STV+QN+DNA QAN LA  A+E+A  GG ++ QV
Sbjct: 285 NHDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQV 344

Query: 429 VVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLA 488
           V TM SIN S++KI DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF+VVASEVRSLA
Sbjct: 345 VDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA 404

Query: 489 QRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQA 548
           QRSA AAK+IK LI DSV K+  G++ V  +G TM +IV S++RV D+M +I +AS EQ 
Sbjct: 405 QRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQT 464

Query: 549 TGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRL 598
           +GI ++NQA+ QMD++TQQNAALVEEA+AA++SL  QA  L   V +FRL
Sbjct: 465 SGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLSQIVGVFRL 514