Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  311 bits (796), Expect = 6e-89
 Identities = 171/295 (57%), Positives = 222/295 (75%), Gaps = 1/295 (0%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           ++E   V  A++ GDL A+       E   L   ++Q    L  I+ D+ +  A +  A+
Sbjct: 234 LDEALHVARAIAGGDL-AKFEIRRGDEITGLLRALNQMSANLFAIVADVGTNVAGVMSAS 292

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
           ++I++GN DLSSRTEQQAS+LEQTA+SMEEL STV+QN+DNA QAN LA  A+E+A  GG
Sbjct: 293 SQIASGNQDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGG 352

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
            ++ QVV TM SIN S++KI DIIGVIDGIAFQTNILALNAAVEAARAGEQG+GF+VVAS
Sbjct: 353 SVVSQVVDTMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAS 412

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVRSLAQRSA AAK+IK LI DSV K+  G++ V  +G TM++IV S++RV D+M +I +
Sbjct: 413 EVRSLAQRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMEEIVGSVRRVTDIMGEITT 472

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFR 597
           AS EQ +GI ++NQA+ QMD++TQQNAALVEEA+A ++SL  QA+ L   V +FR
Sbjct: 473 ASQEQTSGIEQINQAIAQMDQVTQQNAALVEEASATAQSLQEQADGLVRAVRVFR 527



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 202 LDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQHFWQRLRSGEFFVDEYK 261
           L G I   N  F++  GY +DE+ G+ H++ V       + +   WQ L  G  +    K
Sbjct: 26  LKGRITYVNPAFVEASGYAVDELMGKAHNI-VRHPDVPPEAFADLWQTLGQGLPWTGIIK 84

Query: 262 RFGKGGKEIWIQASYNPI 279
                G   W+ A+  PI
Sbjct: 85  NRRSNGDFYWVLANVTPI 102