Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  319 bits (818), Expect = 2e-91
 Identities = 182/352 (51%), Positives = 251/352 (71%), Gaps = 7/352 (1%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           + E   V   +++GD+++++    + E   L   +     +L +I+ ++     TI  A+
Sbjct: 219 IGEAVEVAEKVAAGDITSRIEVRSKDETGRLMTALKAMNESLVRIVREVRMGTDTIATAS 278

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
           ++I++GN DLSSRTE+QAS+LEQTA+SME+L STV+QN+DNA QAN LA  A+E+A  GG
Sbjct: 279 SQIASGNQDLSSRTEEQASSLEQTAASMEQLTSTVKQNADNARQANQLAVSASEVAVKGG 338

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
           +++ QVV TM SI+ S++KI DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF+VVAS
Sbjct: 339 DVVSQVVGTMGSIDASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 398

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVRSLAQRSA AAK+IK LI DSV K+  G++ V  +G TM+ IV S+KRV D+M +I +
Sbjct: 399 EVRSLAQRSAAAAKEIKTLIGDSVEKVEEGSKQVAEAGRTMEQIVGSVKRVTDIMGEITA 458

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQD 602
           AS EQ +GI ++NQA+ QMD++TQQNAALVEEA+AA++SL  QA  L   V++F++   D
Sbjct: 459 ASQEQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQASSLVQTVSIFKI---D 515

Query: 603 TSAPSLLKAVNKR--PQSAPVTRHPASHIAKTPAK-ITAKASSRAQPVMQVA 651
            +A + ++    R  P   PV +     +AK PAK + A+ +  A P  Q+A
Sbjct: 516 ANAVATVRPGFTRITPIPRPVAK-TVRPVAKQPAKALPARRAPVAAPAPQLA 566