Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  291 bits (745), Expect = 5e-83
 Identities = 153/318 (48%), Positives = 232/318 (72%), Gaps = 3/318 (0%)

Query: 284 GKPYKVVKYATNVTQRKMVVNEVKRVMT---ALSSGDLSAQLTHPFEGEFAELGEVISQF 340
           G     V  A  +  R+ ++  ++R +     +++GDLSA+      GEF EL + ++Q 
Sbjct: 202 GAALLAVASAAALLLRQQMLTPLQRAVAFANQMAAGDLSARFQGHANGEFGELTKALNQL 261

Query: 341 IVTLRQIITDINSVAATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQN 400
            V L+ ++ D+      +++A+++I+ GN DLSSRTE QAS+LEQTA+S+EEL+STV+Q+
Sbjct: 262 NVNLQAVVADVRHEVEGVQVASSQIAAGNQDLSSRTESQASSLEQTAASVEELSSTVQQS 321

Query: 401 SDNAMQANILAGKATEIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILA 460
           ++ + +A++L+ ++  +A  G + + +V+ TM  I+ S+ +I +IIGVIDGIAFQTNILA
Sbjct: 322 ANASREASVLSQRSASVAREGNDAMARVIHTMDDISRSSNRIGEIIGVIDGIAFQTNILA 381

Query: 461 LNAAVEAARAGEQGRGFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSG 520
           LNAAVEAARAGEQGRGF+VVA EVRSLAQR+  A+K+IKALI +S  +++ G+ELV  +G
Sbjct: 382 LNAAVEAARAGEQGRGFAVVAGEVRSLAQRTMTASKEIKALIDESTGQVAAGSELVHSTG 441

Query: 521 STMKDIVVSIKRVHDLMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASE 580
            TM ++V S+++V+ L+ADI  A+ EQA G+ ++NQAV Q+D +TQQN+A+VE+ AAA+ 
Sbjct: 442 KTMTEVVQSVEQVNGLIADITHATQEQALGLGQINQAVGQLDSVTQQNSAMVEQLAAAAG 501

Query: 581 SLLAQAEQLYDHVAMFRL 598
           SL AQA+ + D V +FRL
Sbjct: 502 SLQAQAQVMNDAVRVFRL 519