Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  289 bits (740), Expect = 2e-82
 Identities = 152/261 (58%), Positives = 203/261 (77%)

Query: 337 ISQFIVTLRQIITDINSVAATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNST 396
           ISQ  +  R +I D++    T++ A +EI+ GN DLS RTEQ A++L+QTA+SME++ ++
Sbjct: 254 ISQLGLMFRWLIDDVSQQVLTVQSAVSEIAQGNNDLSQRTEQAAASLQQTAASMEQMTAS 313

Query: 397 VRQNSDNAMQANILAGKATEIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQT 456
           VRQN++ + QAN LAG A++ AA GG+ + QVV TM  I E ++KI DIIGVIDGIAFQT
Sbjct: 314 VRQNAETSRQANQLAGTASDAAARGGQAVSQVVQTMGEITERSRKIHDIIGVIDGIAFQT 373

Query: 457 NILALNAAVEAARAGEQGRGFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELV 516
           NILALNAAVEAARAGEQGRGF+VVA EVR LA+RSA AAK+IKALI  SV K+  G  LV
Sbjct: 374 NILALNAAVEAARAGEQGRGFAVVAGEVRGLARRSAEAAKEIKALIGASVDKVEAGTRLV 433

Query: 517 DRSGSTMKDIVVSIKRVHDLMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAA 576
           D +G TM +IV  ++RV DL+++I+SA+ EQ+ GI +V+QAV  +DE+TQQN+ALVE+ A
Sbjct: 434 DDAGKTMDEIVHQVQRVSDLISEISSATIEQSGGIQQVSQAVGHLDEVTQQNSALVEQGA 493

Query: 577 AASESLLAQAEQLYDHVAMFR 597
           AAS+SL  Q ++L + V++FR
Sbjct: 494 AASQSLQQQTQRLVEAVSVFR 514



 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 76/388 (19%), Positives = 151/388 (38%), Gaps = 34/388 (8%)

Query: 193 LTQAVIEFTLDGTILT----------ANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQE 242
           +TQ   EF  + T+++          AN  F+   G+ L+EIQ + H++ V       + 
Sbjct: 7   ITQREHEFPDNATLMSTTDTQSHITYANAAFVNVSGFSLEEIQQQPHNL-VRHPDMPREA 65

Query: 243 YQHFWQRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMV 302
           +   W  L+ GE +    K   K G   W++A+  P++  +GK    +   T  T+ ++ 
Sbjct: 66  FGDMWATLKGGEPWTALVKNRRKNGDHYWVRANATPVI-RDGKTMGYMSVRTKATREEIA 124

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELG-----------EVISQFIVTLRQIITDI 351
             E  R+   +  G       H  +G    +G            V S+  ++L  ++  +
Sbjct: 125 GAE--RLYADMREGRAKHLKLH--KGLLLRIGLMGITTVFKTMRVRSRIRLSLAVLLAGL 180

Query: 352 NSVAATIKLAATEISNGNTDLSSRTEQQASNLE-QTASSMEELNSTVRQNSDNAMQANIL 410
              A  + L     +      +         LE Q A  +E L     + +    +    
Sbjct: 181 VGGAWALGLQGLHWAPFAGLCAVGVGLAGWFLESQLAGPLEALREQALRVATGDTRNVAR 240

Query: 411 AGKATEIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARA 470
             +  EI  +   + +  ++    I++ +Q++  +   +  IA   N L+      AA  
Sbjct: 241 MDRVDEIGMAMRSISQLGLMFRWLIDDVSQQVLTVQSAVSEIAQGNNDLSQRTEQAAASL 300

Query: 471 GEQGRGFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSI 530
            +       + + VR  A+ S   A  +    SD+ ++   G + V +   TM +I    
Sbjct: 301 QQTAASMEQMTASVRQNAETS-RQANQLAGTASDAAAR---GGQAVSQVVQTMGEITERS 356

Query: 531 KRVHDLMADIASASAEQATGINEVNQAV 558
           +++HD++  I   + +  T I  +N AV
Sbjct: 357 RKIHDIIGVIDGIAFQ--TNILALNAAV 382